Gene Slin_6630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6630 
Symbol 
ID8730416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp8061051 
End bp8061947 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content51% 
IMG OID 
Product6-phosphogluconate dehydrogenase, decarboxylating 
Protein accessionYP_003391386 
Protein GI284041456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0812557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTG GATTTATTGG TTTAGGCAAG ATGGGGTTTA ACCTCGTCAG CAACCTGGTA 
AAACATGGCC ATACGGTTGT TGGCTACGAT ATTAACGAAA CGTTAGTAGA GGCTGTCAAA
GGCGAAGGAG CCCAGGGCGC AAATACCTTG CAGGAACTAT ATAATGCACT GCCGGAAAAA
CGGGTACTAT GGCTGATGAT TCCGGCCGGT CCGTTGGTTG ATAATGTGAT TGACCAATTA
TTGGCGGTTA TGCAGGCGGG CGATGTGATC ATTGATGGGG GTAACTCACA CTACAAAGAC
TCACTCCGGC GGCATGCTTA CCTTAAAGAA AAAGGTATTG GTTTCCTCGA TTGTGGTACC
AGTGGCGGAA TTAGCGGAGC CCTGAACGGA GCCTGTACCA TGGTTGGGGG CGATCCGGAT
GTGATTGAGC CGCTCCATGG CATTTTTCGG GACATTTCGG TGGAGGATGG TTATCTGTAT
ACCGGTCCCG CCGGTAGTGG CCACTTCACC AAAATGGTGC ACAACGGAAT TGAATACGGT
ATGATGCAAT CTATTGCCGA AGGATTCGAG GTATTGGAGA AGAGCCAGTT TCCGTTCGAT
TTCGAAGCCG TTGCCAAAAT GTGGGGACAT GGCTCGGTTA TTCGCGGCTG GCTGATGGAG
CTGACGGAGA ATGCCTTTAG CAAAGATCCC AAGCTCGATG CTATCAAAGG GCGCATGTTC
TCGTCGGGCG AAGGTCGTTG GACACTCGAA ACAGCGCTGG ACCTGGGCGT ACCAACACCC
GTTATTGCGC TGTCCTTGCT GACACGCTAC CGCTCTCTGC AGGACGATAC ATTTACGGGT
AAAGTTGTGG CAGCTTTGCG GAACGAGTTC GGCGGGCACG CTGTCGAGAA AAAATAA
 
Protein sequence
MNIGFIGLGK MGFNLVSNLV KHGHTVVGYD INETLVEAVK GEGAQGANTL QELYNALPEK 
RVLWLMIPAG PLVDNVIDQL LAVMQAGDVI IDGGNSHYKD SLRRHAYLKE KGIGFLDCGT
SGGISGALNG ACTMVGGDPD VIEPLHGIFR DISVEDGYLY TGPAGSGHFT KMVHNGIEYG
MMQSIAEGFE VLEKSQFPFD FEAVAKMWGH GSVIRGWLME LTENAFSKDP KLDAIKGRMF
SSGEGRWTLE TALDLGVPTP VIALSLLTRY RSLQDDTFTG KVVAALRNEF GGHAVEKK