| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6629 |
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| Symbol | |
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| ID | 8730415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 8059366 |
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| End bp | 8060742 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003391385 |
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| Protein GI | 284041455 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0935269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCGT TGTACGTATC CCTTCTTTTT CTGTATCTGG CTATGCAGAT GCATTCGTCC
TTTTCTCAGC CAGCGCAAAC GCAAACAGCC ACTGATCACT TTAACGAAGG CATTCAGAAA
AGTGCCGCTA AAGATTATCC CGGTGCCTTG CAGGCCTTCA CCATGTCGAT TATCCAAAAT
CCAGAAAACG GACCGAGTTA TTATAACCGG GCGCTCACCA AAATCAGTCT GAATGACATT
CAGGGGGCTA ATCTCGACCT CGATTTAGCC ATTGAATTTA CCCCCGGCGA TGCCAATGCG
TACTTATACC GGGGCATAAA CCGTACCCGC CAGGAAGACT TCCGGGGAGC TATGCAGGAT
TTCAACAGGG CTATTGAGCT GAGCCCCAAC GATGCGCTAT TCTATTACAA CCGGGGTCTC
TGCCGACTTC AGATCAACTA CACTACCACG GCACTGGCCG ACTTTACGAA AGCAGTGACA
CTGGCACCTA ATGATGTTAC GATGCTGATT GCCAGAGGAA ACTGCAAAAT GCAGTTGAAC
GATTACAAAG GGGCGCTGGC CGACTATAAC CTGAGTCTCG AAAAATCGCC CAACAAACCA
CTGGCACTGG CAGGCCGTGG GTACGCCCGT TTTAAACTTG AAGATTATAA AAACGCAATT
CTCGATTTTA ACCGGGCCGT CGAGTTAAGC AAAGACGATC CCGAACTGTA TTACCGGCGC
GGGCTGGTTA AATCCAGGCT GGGTGAATTT GAAAACGCGC TTACCGATTT CGATAAAACA
GTGCAGCTAA ATCCCAGTCA TTTCAGGGCG CTATTCAGCC GTGGCTTCTG CAAGAGCCGG
TTAGGCAATG TGAAACAGGC CGTCGCCGAT ATCGACAAGT CCATCGAGAT GGGTACGGCC
AACACAACCA ACAAAGCTTA CTACAGTGAT TTCATTACGG CCAGTACGCT GCAGTTGTTC
GGCTCCGTTG TTCAGGACCG CTACAAGGCC ACGGAATTAA CCGACGACCG CGCGGATGCT
TATCTGGTAC GGGGTATCAT CCGAAACTCG GGGGGCGATA GCAAGCTGGC ACTGCAAGAC
CTCAACCGGG CCGTTGAACT AAGCCCAACC AACGCCGAAA CCTATTTCAT TCGCGGTGTT
GTCCGGTCGT CGCTTGGCGA TCAGAAAGGT GCACTCATTG ACTGCAACAG TAGCATTAAA
TTGAACCCGC GTCATGCCGA AGCGTATTAC CTGCGGGGTA TCATCCGTTT CGATTCGGGT
GATGAAGCCG CAGCCTGCAT TGATCTGAGC CGGTCGGGCG AGTTGGGCTA TTCGGGAGCC
TACAAGATTA TCAGCGCCAA ATGCAATGTG ACCTCCCGGC CAACAGCCAT GCGCTAG
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| Protein sequence | MRPLYVSLLF LYLAMQMHSS FSQPAQTQTA TDHFNEGIQK SAAKDYPGAL QAFTMSIIQN
PENGPSYYNR ALTKISLNDI QGANLDLDLA IEFTPGDANA YLYRGINRTR QEDFRGAMQD
FNRAIELSPN DALFYYNRGL CRLQINYTTT ALADFTKAVT LAPNDVTMLI ARGNCKMQLN
DYKGALADYN LSLEKSPNKP LALAGRGYAR FKLEDYKNAI LDFNRAVELS KDDPELYYRR
GLVKSRLGEF ENALTDFDKT VQLNPSHFRA LFSRGFCKSR LGNVKQAVAD IDKSIEMGTA
NTTNKAYYSD FITASTLQLF GSVVQDRYKA TELTDDRADA YLVRGIIRNS GGDSKLALQD
LNRAVELSPT NAETYFIRGV VRSSLGDQKG ALIDCNSSIK LNPRHAEAYY LRGIIRFDSG
DEAAACIDLS RSGELGYSGA YKIISAKCNV TSRPTAMR
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