| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6591 |
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| Symbol | |
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| ID | 8730377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 8005628 |
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| End bp | 8008846 |
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| Gene Length | 3219 bp |
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| Protein Length | 1072 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_003391347 |
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| Protein GI | 284041417 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.490488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATA CTTTCATTAA AAGGCCCTTA CTCTCAACGG TTATCTCCGT GTTGATCGTG
TTGCTGGGCG TGCTGGCCCT TACCGGCCTG CCCGTTACGC AGTTTCCCGA CATCGTCCCG
CCGTCCGTAA CGGTCACAAC CAAATACACC GGAGCCAGCG CCGATGTGTG CGTTAAAGCG
GTAGCGACTC CGCTCGAACG GGCCATCAAT GGGGTGCCCA ACATGACTTA CATGACCTCT
ATTTCGGGGA ATGACGGTTC CACTCTGATT CAGGTATTTT TTAAGGTAGG GACAGACCCC
GATCTGGCGG CCGTCAACGT GCAGAACCGG GTAACAACGG TCATGGACGA ACTCCCCGAA
GAGGTAATTA AGGCCGGGGT CGTGACCGAA AAAGAGGTAA ACAGTATGCT GCTCTACCTC
AACATTGTGA GCGACGACCC GAAAGTGGAT GAAAAATTCA TCTATAACTT CGCCGATATC
AACGTACTAG CCGAACTCAA GCGCATCGAC GGGGTGGGCT TTGCTGCCAT TATGGGCAGC
CGGGATTACT CCATGCGTGT GTGGCTCAAA CCCGACCGCA TGACGGCCTA TGACATCTCG
GCCGATGAAG TCATTGCCGG TATTCGGAAA CAGAACGTCG AAGCAGCCCC CGGAAAAGCG
GGCGAAAGTG CCGACCAGAC ACCGCAATCA CTACAGTATG TGCTTCGGTA TACCGGCAAA
TTCTTTGAAC CGGCCCAGTA CGAGAACATT GTGCTACGGG CTAATGCCGA CGGTTCACTG
CTGCGCCTGA AAGATATAGC CGATGTTGAA TTTGGCTCCC TCGACTACGG CGTACTCTCC
AAAAACGACG GCCGCCCCTC AGCGGCTATC ATGCTCAAGC AACGGCCCGG TTCCAACGCC
AGCGACGTTA TCGCCAACGT AAAAGCGCGT ATGGCCGAGT TGAAAGAAAC GTCGTTTCCG
GCGGGTATGA CGTACAATTA TGCTTACGAT GTGTCGCGCT TTCTGGATGC GTCCATCCAC
GAAGTGATCC GAACCCTCAT CGAAGCCTTC GTGCTGGTGT TTCTCATCGT ATTCCTCTTT
TTGCAGGACT GGCGCTCAAC GCTCATCTGT GCACTGGCGG TACCTGTGGC CCTAGTCGGC
ACGTTTGCCT TCATGAGCGC CATCGACTTT TCCATTAACC TGCTCACCCT GTTTGCGCTG
GTGTTGGCCA TCGGTATTGT GGTCGACAAT GCCATTGTGG TGGTGGAGGC CGTTCACGCC
AAGATGGAAG AAGAGCACCT TACACCACGA GCCGCCACCT TTGCCGCCAT GAGCGACATT
GCCGGGGCTA TTGTAGCCAT TACGCTGGTG ATGTCGGCGG TGTTTGTACC AGTCGCGTTT
ATGTCGGGAC CGGTGGGTAT TTTCTACCGG CAGTTTTCGC TCACGCTGGC CATTGCCATT
GTCATTTCGG GTGTTAACGC CCTCACGCTT ACTCCCGCCC TTTGCGCCAT TCTGCTCCGG
CCGATGCACG GTGAGAAGAC GGGGCTACTG GGTCGGTTCT TCATCAAATT CAACCGGGGA
TATGAGTCGC TGGCGAGCTG GTACCAGGGA CTGCTCCGCC GGGTCGTGAG CCGGGGAATC
ATTACGTGGG GACTGCTGCT GCTGTTCGTT CTGGCGACCT GGGGCATCAG CACCGTGCTG
CCGGGGGGCT TCATCCCGAC GGAAGACCAG GGGATGCTGT ACGTAAACGT AACCACGCCC
GTGGGGGCCA CCGTGAGCCG CACCGAGAAA GTACTGGACG CCATCGAAGC GGTTGCCTCC
GAGCAGGAAT CGGTCGATAA CGTTTCGACA CTGGCCGGGT TCAGTCTGCT CACCGACGGT
GCCGGGGCTT CGTACGGTAT GGCCATGATC AACCTCAAGC CCTGGGAAGA GCGGAACGAG
TCGATGCAGG AGTTGATTGC CACCCTGGAA GAAAAAACAA AAGGCATCAC CGACGCCAGC
ATTCAGTTTT TCCCTCCGCC TACGGTGCCG GGTTTCGGTA ACTCAAGCGG GTTTGAACTG
CGGATGCTTG ACAAGGGCCG GAGCGACGAC CTGAACAAAA CGGCTAAAGT AGCAGGGGAT
TTTATCGACG CCCTGAAACG ACGCCCCGAA ATCGGGGATG CCTTTACCAG TTTCGACCCC
AATTTCCCGC AGTACATGCT GCACGTCGAC CAGGAGAAAG CGTCCCAGAA AGGGGTTTCC
ATCGACAATG CCATGAGCAC CCTGCAAACC CTGATGGGGA GCTACTACGC GTCGAACTTT
ATCCGGTTCG GGCAGATGTA CAAAGTGATG GTTCAGGCCG CTCCCAGCTA CCGGACCAAA
CCCGAAGATG TGTTGTCGAT GCGCGTTAAG AATGACCAGG GCGAAATGGT CCCGTATTCT
AACTTCGTCA GTCTGGAGCG GGTGTACGGA CCTGAACAGC TTACGCGCTA CAACATGTAC
ACCTCGGCGA TGATCAACGG AGATGCCGCC CCCGGCTACA GTAGTGGCGA CGTGATCAAG
GCCATCGAGG AAGTAGCCGC CAAAGAACTC CCCAAAGGAT ACGCCTACGA ATGGTCGGGG
ATGTCGCGGG AGGAGGTGAT GTCGGGCGAT CAGGCGATCT ACATTTTCGC CATCTGTCTG
GTGTTCGTTT ACCTGCTGCT GGTGGCCCAG TACGAGAGTC TGTTTCTGCC CCTGCCGGTG
CTGCTGTCCT TACCCACGGG CGTCTTCGGT TCGTTTGCCT TTCTGCAACT GGCGGGTCTG
CAAAACAACA TCTACGCGCA GGTATCGCTG GTCATGCTCA TTGGCTTGCT GGGAAAAAAC
GCCATTCTGA TCGTGGAGTT TGCCAACCAG CGTCAGAAAG AAGGGCTACC CATTATAGAA
GCCGCACTAG AGGGGGCGGT ATCGCGTCTG CGTCCCATTC TGATGACGTC CTTTGCCTTT
ATTGCCGGTC TGATTCCGCT TTGTATGGCG TCCGGGGCCG GTGCCCTGGG TAACCGCTCT
ATCGGTACGG CAGCGGCTGG CGGTATGTTT ACCGGCACCA TTTTCGGGCT GGTGATCATA
CCGGGGCTGT ACGTCATCTT CGCCAAACTA GCCGAACGCT TCGCGTCCAA AAATACGGAG
GGCGATGAGC CGAACTCCAA TCATTCAAAA CAAACCCATG CGGATGTCGT CGCTGTATCC
ACCCAACCTC ACGTTAATGG AAAAGTCATT CATTCATAA
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| Protein sequence | MFNTFIKRPL LSTVISVLIV LLGVLALTGL PVTQFPDIVP PSVTVTTKYT GASADVCVKA
VATPLERAIN GVPNMTYMTS ISGNDGSTLI QVFFKVGTDP DLAAVNVQNR VTTVMDELPE
EVIKAGVVTE KEVNSMLLYL NIVSDDPKVD EKFIYNFADI NVLAELKRID GVGFAAIMGS
RDYSMRVWLK PDRMTAYDIS ADEVIAGIRK QNVEAAPGKA GESADQTPQS LQYVLRYTGK
FFEPAQYENI VLRANADGSL LRLKDIADVE FGSLDYGVLS KNDGRPSAAI MLKQRPGSNA
SDVIANVKAR MAELKETSFP AGMTYNYAYD VSRFLDASIH EVIRTLIEAF VLVFLIVFLF
LQDWRSTLIC ALAVPVALVG TFAFMSAIDF SINLLTLFAL VLAIGIVVDN AIVVVEAVHA
KMEEEHLTPR AATFAAMSDI AGAIVAITLV MSAVFVPVAF MSGPVGIFYR QFSLTLAIAI
VISGVNALTL TPALCAILLR PMHGEKTGLL GRFFIKFNRG YESLASWYQG LLRRVVSRGI
ITWGLLLLFV LATWGISTVL PGGFIPTEDQ GMLYVNVTTP VGATVSRTEK VLDAIEAVAS
EQESVDNVST LAGFSLLTDG AGASYGMAMI NLKPWEERNE SMQELIATLE EKTKGITDAS
IQFFPPPTVP GFGNSSGFEL RMLDKGRSDD LNKTAKVAGD FIDALKRRPE IGDAFTSFDP
NFPQYMLHVD QEKASQKGVS IDNAMSTLQT LMGSYYASNF IRFGQMYKVM VQAAPSYRTK
PEDVLSMRVK NDQGEMVPYS NFVSLERVYG PEQLTRYNMY TSAMINGDAA PGYSSGDVIK
AIEEVAAKEL PKGYAYEWSG MSREEVMSGD QAIYIFAICL VFVYLLLVAQ YESLFLPLPV
LLSLPTGVFG SFAFLQLAGL QNNIYAQVSL VMLIGLLGKN AILIVEFANQ RQKEGLPIIE
AALEGAVSRL RPILMTSFAF IAGLIPLCMA SGAGALGNRS IGTAAAGGMF TGTIFGLVII
PGLYVIFAKL AERFASKNTE GDEPNSNHSK QTHADVVAVS TQPHVNGKVI HS
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