Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6573 |
Symbol | |
ID | 8730359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7981922 |
End bp | 7982560 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_003391329 |
Protein GI | 284041399 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.775235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCAGT ACATGATTAG TCCCTTACAG TACATAACGA CCCGCCCCGA ACAGGCAGAT GCGGCTTGCC ATGCCGGAGC CAACTGGATT CAGCTCCGAC TGAAAAATCT GGCCTATGCC GACTGGAAGG CCATCGCCCT GGAAACGCTG GCCGTTTGCC GACAATACAA CGCTACCCTG ATCCTCAATG ACAATCCGAA GCTGGCCGCC GACATTGGTG CCGATGGTGT GCATCTGGGT CAGGAGGATA TGCCCGTTGC CGAGGCACGC GCTCTGCTGG GCGATAGGTT CATCATCGGC GGAACGGCCA ATACTCTGGA AACCATATTG GCGCATCATC GGGATGGCGT CAACTACGTG GGACTGGGAC CTTTCCGGTT CACGACCACC AAAGAAAAAC TAAGCCCCAT TCTTGGTCTG GACGGGTACG CACGCATCCT GTCGGCGTTG CCGCAACGGC AGATTTCGCT GCCCGTCATT GCCATTGGCG GGATTACCCT GGCGGATGTG CCCGCTTTGC TGGCAACGGG CGTGTATGGT GTCGCGGTGT CGTCGGCCAT TACGGGGGCA TCCGACCCTG CGGCACAAAC GCGTCTGTTT CTCAGTCAAC TAACGACCTC AACTTCTTTT TTCGAATGA
|
Protein sequence | MSQYMISPLQ YITTRPEQAD AACHAGANWI QLRLKNLAYA DWKAIALETL AVCRQYNATL ILNDNPKLAA DIGADGVHLG QEDMPVAEAR ALLGDRFIIG GTANTLETIL AHHRDGVNYV GLGPFRFTTT KEKLSPILGL DGYARILSAL PQRQISLPVI AIGGITLADV PALLATGVYG VAVSSAITGA SDPAAQTRLF LSQLTTSTSF FE
|
| |