| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6571 |
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| Symbol | |
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| ID | 8730357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7977159 |
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| End bp | 7981187 |
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| Gene Length | 4029 bp |
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| Protein Length | 1342 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Ig family protein |
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| Protein accession | YP_003391327 |
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| Protein GI | 284041397 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00409169 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTGCC GAATTTTTCT CCTCTTTTTT GCGATTTCGG TTGCCCTTTG CTCACTCAAA
CCCGCTCTGG CTCAATCCAA ACGTCTTGTC CCGTTTACGT TCACGCTCTC CGGCGACAAG
CGCACCAGTG CAGGTGTGTT TACCAAAGAT GGGGTTCTGA TTCGCACGCT CTGGAGCGGT
GTCGATTTGA AATCCGGTTC CTACACCAAA TATTGGGATG GTCTCGATGA CGAAGGTCAG
CCCGCTCCGT TAGCTTCGTA CGACATCAAA CTGATGTCGA ATAATGTAAG CTATACCTGG
GAGGGGGTAA TTGGGAATTC GTCCTTTGGC AAAAGCCAGG GTAATGCCCT TCAACGTGGT
TTTCTGCGGA TTCAGTCTAT GGCCGTTACG GGCAATACCG TCTACTACGG TGTAGGGTAT
GCCGAAGGGA ATCCCTCTCA AGCTAAATTC AACGTCAGTG CGCCCCAGCA GCGAATCGAG
TTTTCACCCA AAGGCAGTAC AGATCAGGCT ACTCTGTTTG TCGCTACGGA TGGTACTACG
GTGTATTGGG CGGGTTACGA TGGCTATAAC AACGGCAACA ACTGGTTCAT CTATGGCACG
AATACCAGCG ATAACGCCCA GCGGCAGTTT CCTTACGGCC AGTCGCAGAA GATGGTCATG
GGTGGTACCT ACAGTTCATG TATCGATGTT ATAAACGACT CGCAGGGCAC CATAACGGGG
CTAGCCGTGC AAAAACGGGG GCGCTTTTTG TTCGTGTCGC ACAAGGCCCG CCATCAGGTA
CGGGTAATCG ACAAAGTTAG TGGGGCACAG GTACAAAGCC TGTTTTTCAA TGATGCCGCC
GGTTTGGCAG TAGACCGGGA CGATAACCTG TGGGTTATCA ACGGAACAAC GGTGGGCAAG
TTCAGCGTCC GGTCCGACGG TACGCTGTCC GATCCGCAAC TGATGCTGTC GGGTATAGAA
GCTCCCATGG CACTGGCGGT ATCACCCGAT AACAGCACAG TACTCGTGGC CGATGGCGGA
GCCAGCCAGC AGGTCAAGGC TTTCAATAAT CAGACGGGTG AAGCCGTCTG GCAGCTAGGT
CAGCCGGGAG GGTATAGTTC AGACCCCAAC GTGAGCAATG ATAAATTTTA TTTCTCGGAT
GTGAGTGGCG GTATTAACAG TACGTTTCTT GCGTATAATG AGGATGGTTC ATTCTGGGTG
GGCGACTCGG GTAACTACCG GGCCCAGCAC TACTCGAGCA GCCGTACGTT TATTGATCGG
ATTCAGTACA TGCAGAACAA CTACAGCTGT TATGTAGATC AGAACAATCC GCGTCGTGTG
TTTGGTCAGT ATCTGGAATT TGCCATCGAC TACAATCAGC CCGTAGGTTC GGGCTGGACG
CTGGTCAAGA ACTGGCGAGC CACAATTCCT GCCAGCTACT TCGAAAATCT GACCATCAAC
CACATCTACA TCACCCATAT TTTTCGCGAT GTGGTGACAC TTTCCAACGG GCGGACATAC
GGGTTTCTGC GTCGTTTTAC CGACAACAAG TGGGTACTGG TGGAGTTGCC CGCAACGGGT
CCCGTTCGCA TGACCGGTAT CGCCTTCGAT ACGGACAACC GTTATACCTA TCACCTCTGT
GCCGATGGCT CCCTGAAGCA GTCGATCGGT AACCTCAGCG GTACAACAGG AAACGTTAGC
TGGCAAAATC GGCCATTGAC TGGCTTCGAC GGCAACAATG ATCCCATTTG GGGACCGGCC
GTACCTTATA CTGTAGCGCC CATTGCCAGC GGGGGTGAGC CGATCACCTG GCAGGGCGGA
CAGTCGAGAA CGGGCGAAAC TACCACATCG AATGTTATGG TTACGTTCGA TGCCGGTAAG
GTCGACGGCG ACAAAGGGGG CGGGTACCAT TTGGGGGGTA TTCGGGTTAA CGACAACAAG
TGGCTATGGA AAACCGCCCG CGCCACGTCG GTCGATTATC AGGGACCTTA TCCCATCGAC
GGGGCCTACG ATGTAGGGAA CGACGTCGAG TACGGTGGGG GGGGCGTGAG CGTTTTCGAG
CGAAATATTT TCTGGAATTA CCACGGTGAG TTCTGGAAAG ATACCCAGGT CAACAAATGG
CAGCATGTGT ACGACAACGG CCTGCTACTG GGTATATTCG GAAAAACGGG GCTGGAGGCC
CGGGTTGAAG CACCCGACGG AGGTCCCGTG CCGGGTATGG CCGGAAACGT TTACTATGGT
ACGGTGATCA AGGCACCGAA CGGCAACGTG TACCTCTACC ATGGCGAAGA AGCGGGCTGG
TCGGGTATAC ACCGCTGGCG GATAGACGGG CTCAATACCA TTCAGGAGCA AATGGTTTAC
CTGCAACAGC TGGGTAACTA CGGATTCGGG GAAGAGCCGT TGGGAGTGGA GGGCGTCGAT
CTGCTGAGCG GGCTGCCCCT GCGCGGAGTG GTTGCCGATA ATACCGCCGG ATGGAAACGA
AATCCGGCGG GTGAATCCAA TACCGCGTAT AATGACAAAT GGACGGTGAA AACGGGCATC
ATGAGCTACG ACCGTTTCAG CAGCCCCGAT CTATACACGA ACTTTTCCAA ATCGGGCGGC
ATCTACACCG TAACCCGCGA CCTGGGCACC ACGGGCAGTT TGTCGAGCTG GAGCTTGAAA
GGCGTTATTA CATTCAACGG TACTAACCCC AACAACGGCA CACCGGAGCA GTCTGATTCG
GGCGGTAGTT ATTTTGAGGT ACTGGACAAC AACGGGAAGG TGCTGGCCCG AATCTTTAAC
CAGGTATTTT TTGGTGAAAC CAATACGCCG GTGCGCCTGA TGGCAAACCG TCAGGTTATG
GCGCAGGGAG AGTTTTTTAA CCCGGCCACT GCCACCGGAA CAACCTCTGA TGCCATCGAC
ATAAGCATGT CTGGCGGAAT GCTGACGGTG AAATACGGCA ATTTTTCGCC TGTTACGGTA
CCTGCTTTCG ATAACAGTGG TAATCTGCAA AACCCCAAAA CGGTTCGGCT GTTTTTCTGG
AGCAATGGCC GGAATTACGA ACGAACCATC GACATCCAGC GGTTGCGTTT CTCGGCTGGT
TCGGCAACCA GTTCTACGTC TTCGGCCCCC ACTGTGGCGA GCCCGCTGGC CGATCAGGTT
GCTACTGTCG GGCAAAATCT GTCTTATACT TTCCCGGCTG GCAGCTTTGC TGATGCCGAT
GGCGATAATT TGAGCTACTC CGCCAGTTTA TCGAGCGGGG CGGCCCTGCC CGGCTGGCTG
ACCTTTAACG GATCGGGCCG CGCTTTTAGC GGGGTAGCTA CAACCAGCGG TTCGTTAACC
ATTCGAGTAA CTGCAAGCGA CGGCCGGGGC GGACTGGCTG CCGATGACTT CAGCCTGACA
GTCAATCCGG CACCCGTTTC CCAGCAGGCG GTGGTAAGCC TGAGTTTGAT GAATGCCGAT
AACCAGCAGG AGATTAAAGT GCTTGCCGCC GGTGAGCAGC TTAACCTGGC TACGCTGCCT
ACGCGTAACA TCAGTATCCG GGCCAACACC AATCCCGGTA CAGTCGGCAG TGTGAAGTTT
TCCCTCAGTG GTGGCCGGAT TCATAGCATT GTCGAGTCGA TACTTCCTTA TGCCCTGTTT
GGTGATAACA GCGGGAAATA CAACGGCTGG ACACCCGCCG TAGGGCAGTA TAGTCTGACG
GCTACACCCT ATACGAACAG TGGGGCGAGC GGTACAGCCG GTACGGCGCT GACTATCAAC
TTCTCGGTTA TCAATCAGGC CCCCGGCGGA CGTTTGGGTG CAACCGAGCC GCAGGAGTTG
ACCGGCTTAC AGGTTACGTA CTATCCAAAT CCCTTTACCG AATCGTTTAC GGTACGGGTT
CAGGGCCAAT CGTCGGCCAA ATTACCCTTG CTGATGTATG ACAGCTACGG CCGGGTGGTG
TTGCAGCGGG ACGATCTAGC GCCTGAAGAG ATCATCAACG TAAGCAGCGG GTTTGCGCCG
GGCGTGTACC TGCTTCAGGT AGGAACAGGC GCCGAAACCA AGCGATACAA GATCATCAAA
GCGCAGTAA
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| Protein sequence | MICRIFLLFF AISVALCSLK PALAQSKRLV PFTFTLSGDK RTSAGVFTKD GVLIRTLWSG
VDLKSGSYTK YWDGLDDEGQ PAPLASYDIK LMSNNVSYTW EGVIGNSSFG KSQGNALQRG
FLRIQSMAVT GNTVYYGVGY AEGNPSQAKF NVSAPQQRIE FSPKGSTDQA TLFVATDGTT
VYWAGYDGYN NGNNWFIYGT NTSDNAQRQF PYGQSQKMVM GGTYSSCIDV INDSQGTITG
LAVQKRGRFL FVSHKARHQV RVIDKVSGAQ VQSLFFNDAA GLAVDRDDNL WVINGTTVGK
FSVRSDGTLS DPQLMLSGIE APMALAVSPD NSTVLVADGG ASQQVKAFNN QTGEAVWQLG
QPGGYSSDPN VSNDKFYFSD VSGGINSTFL AYNEDGSFWV GDSGNYRAQH YSSSRTFIDR
IQYMQNNYSC YVDQNNPRRV FGQYLEFAID YNQPVGSGWT LVKNWRATIP ASYFENLTIN
HIYITHIFRD VVTLSNGRTY GFLRRFTDNK WVLVELPATG PVRMTGIAFD TDNRYTYHLC
ADGSLKQSIG NLSGTTGNVS WQNRPLTGFD GNNDPIWGPA VPYTVAPIAS GGEPITWQGG
QSRTGETTTS NVMVTFDAGK VDGDKGGGYH LGGIRVNDNK WLWKTARATS VDYQGPYPID
GAYDVGNDVE YGGGGVSVFE RNIFWNYHGE FWKDTQVNKW QHVYDNGLLL GIFGKTGLEA
RVEAPDGGPV PGMAGNVYYG TVIKAPNGNV YLYHGEEAGW SGIHRWRIDG LNTIQEQMVY
LQQLGNYGFG EEPLGVEGVD LLSGLPLRGV VADNTAGWKR NPAGESNTAY NDKWTVKTGI
MSYDRFSSPD LYTNFSKSGG IYTVTRDLGT TGSLSSWSLK GVITFNGTNP NNGTPEQSDS
GGSYFEVLDN NGKVLARIFN QVFFGETNTP VRLMANRQVM AQGEFFNPAT ATGTTSDAID
ISMSGGMLTV KYGNFSPVTV PAFDNSGNLQ NPKTVRLFFW SNGRNYERTI DIQRLRFSAG
SATSSTSSAP TVASPLADQV ATVGQNLSYT FPAGSFADAD GDNLSYSASL SSGAALPGWL
TFNGSGRAFS GVATTSGSLT IRVTASDGRG GLAADDFSLT VNPAPVSQQA VVSLSLMNAD
NQQEIKVLAA GEQLNLATLP TRNISIRANT NPGTVGSVKF SLSGGRIHSI VESILPYALF
GDNSGKYNGW TPAVGQYSLT ATPYTNSGAS GTAGTALTIN FSVINQAPGG RLGATEPQEL
TGLQVTYYPN PFTESFTVRV QGQSSAKLPL LMYDSYGRVV LQRDDLAPEE IINVSSGFAP
GVYLLQVGTG AETKRYKIIK AQ
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