Gene Slin_6541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6541 
Symbol 
ID8730327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7938555 
End bp7939421 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content52% 
IMG OID 
Productaldo/keto reductase 
Protein accessionYP_003391297 
Protein GI284041367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.808367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAA GCGATCAACA ACCTGCTGTA CAGGCCGGTA CAATTACCAT CGGTGGCGAT 
TTAACCGTTA ACAGAATGGC GTATGGCGCC ATGCGCATCA CCGGCGACGG TATCTGGGGA
CCACCCAAAG ACCACGATGA AGCCATCCGG GTACTGCGCC GTACCCTCGA ACTGGGCATC
AACTTTATCG ACACTGCCGA CAGCTATGGC CCGCACGTGT CGGAAGAGCT TATCGCCGAA
GCCCTTCACC CCTACCCGGA TGGTCTGGTT ATCGGAACAA AAGGTGGCTT ATTACGTACC
GGCCCGAACC AGTGGCCAGT CGATGGGAGC CGTAAACACC TCGAAGAAGC CCTGAACGGA
AGCCTCAAAC GCCTGAAACT GGACCGGATT GATCTCTATC AGCTTCACCG CTTCGATGAT
AAAGTACCCT CTGAGGAATT CCTCGGCTTT TTGAAAGAAG CCCAGCAGCA GGGTAAAATC
CGGCACATTG GTTTGTCGGA AGTGGGCATT GAGCAAATCG AAGAGGCTAA ACAATACTTC
GAGGTTGTTT CTGTCCAAAA CATGTACAAC TTCGGGCAGC AACGCTGGAA TGATGTACTG
AAATACTGCG AGCAGAATAA CATCGCCTTT ATCCCCTGGT ACCCACTCAA TGCCGGTAAT
GTAGCCGCCG AAAATGCGAT CAAAAAAGTA GCGGAACGCC ACGGTGCTAC GGATTATCAG
GTCGCGCTGG CCTGGTTACT GGCTGCGTCG CCGGTTATGT TGCCCATCGC CGGAACCTCA
TCCGTAAAAC ACCTGGAAGA GAACATTAAA GCGGCTACTA TCAAGCTGAC AGATGAAGAT
TTTCAGGATA TGCCCTTGCC TAAGTAA
 
Protein sequence
MQASDQQPAV QAGTITIGGD LTVNRMAYGA MRITGDGIWG PPKDHDEAIR VLRRTLELGI 
NFIDTADSYG PHVSEELIAE ALHPYPDGLV IGTKGGLLRT GPNQWPVDGS RKHLEEALNG
SLKRLKLDRI DLYQLHRFDD KVPSEEFLGF LKEAQQQGKI RHIGLSEVGI EQIEEAKQYF
EVVSVQNMYN FGQQRWNDVL KYCEQNNIAF IPWYPLNAGN VAAENAIKKV AERHGATDYQ
VALAWLLAAS PVMLPIAGTS SVKHLEENIK AATIKLTDED FQDMPLPK