| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6519 |
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| Symbol | |
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| ID | 8730305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7910071 |
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| End bp | 7911471 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003391275 |
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| Protein GI | 284041345 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.510371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTTG CTCAACGCCC GCTGTTGCGT ACCTACCGCG CCGAATTTGC CGATACCCTT
CGCCTAAGTA TACCAATCAT TATTGCGCAG TTGGGTGTGG TCTTAATGGG CGTAACAGAC
AACCTGTTTG TGGGGCGATT GCTGGGGGCG GTACCGTTAG GCGCTGCCGG TCTGGCCAAT
TCGTTGTCTT TCCTGATGTC GAGCATTGGC GTGGGGGGCA TGTCGGTGGT GGCCGCGCTG
GTCTCCAAAG CCAGTAACCA GAGCGATCCG GCGGGGGTAA ATCGGCTGTT TCGGGCTGGA
TTACGAGTTG CCGGGCTACT GAGTATTCTG CTGGGCGGTC TGTCTGTGCT GTTAGCCTTT
AACTTTAGCC TCTTCGGACA AACGGCCGAA GTAACCCGGC TGGCGCGCGA CTTTATGCTG
ATTTTAAGTG CGTCGCTCTT ACCACTATTA ATTTTTGTAG CGGCTCGACA ACTGTGCGAC
GGCCTGCGCT ATCCTCGGGT AGCCATGGCC ATAACCTTGT CGGCATTAGG GATAAATGCC
CTCTTCAACT ACGTATTTAT TAAAGGTGCT GGCCCATTCC CGGCATTGGG ACTGATGGGT
TCAGCGTTGG CTACGCTGCT GTCGCGAACG TTTATGGCGG GGGCGATGCT GCTCTATATT
TACCGAACAG CACATTTTGG GGCTTACCTG AAACGGGAGT TCAGGTCACT GCCGTCAAAA
GAAGAAGCCT GGATCATACT ACGGCTGGGC ATTCCGGGTG GGCTGACATT TTTCTTCGAG
GTAGCTACCT TTTCGCTGGC GGTTGTGATT GTTGGGTGGC TGGGAGAGGC TCAGCTGGCT
GCTCATCAGA TTGCCATCAA TATGGCGTCG GTAACCTATA TGATGGCGAC GGGTATTTCG
TCGGCGGCTG CCATTCGTGT CAGCGCGGCT GTGGGGCGCA GGAGCCGGGA GGAGGTCTGG
CGAGCCGGGG TGGCTGCTTT TCTGTTGTCG GTAAGTTTTA TGAGCGTTAC GGCCCTCGTG
TTCCTGACCG CCAACGACTG GCTCGTAACG CTTTATCTTC GGGATAATCC GGCCGTTATG
AGTATTGCGG CTTCGCTGGT GATCATGGCG GGGTTCTTTC AGCTTTCCGA TGGCGTGCAG
GTGGTGGCGC TTGGGGGGTT GCGTGGATTA TCGGACGTGA ACGTGCCTAC GCTGATTACG
CTGTTTTCCT ACTGGGTGGT TGCCTTACCA TTAAGTTACG TCCTGGCTTT TCCGATGGGC
ATGGATGCCG TTGGGGTCTG GATCGGACTA TTAGCGGGTC TGTCCATTGC CGCCGTTCTG
CTGACCTGGC GTTTTTTTAG ACGGGTAAAA CGCGTCGATC TGTTTACCGG GTCCATTGTT
TCAGATGCGC CAATCGGCTG A
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| Protein sequence | MSLAQRPLLR TYRAEFADTL RLSIPIIIAQ LGVVLMGVTD NLFVGRLLGA VPLGAAGLAN
SLSFLMSSIG VGGMSVVAAL VSKASNQSDP AGVNRLFRAG LRVAGLLSIL LGGLSVLLAF
NFSLFGQTAE VTRLARDFML ILSASLLPLL IFVAARQLCD GLRYPRVAMA ITLSALGINA
LFNYVFIKGA GPFPALGLMG SALATLLSRT FMAGAMLLYI YRTAHFGAYL KREFRSLPSK
EEAWIILRLG IPGGLTFFFE VATFSLAVVI VGWLGEAQLA AHQIAINMAS VTYMMATGIS
SAAAIRVSAA VGRRSREEVW RAGVAAFLLS VSFMSVTALV FLTANDWLVT LYLRDNPAVM
SIAASLVIMA GFFQLSDGVQ VVALGGLRGL SDVNVPTLIT LFSYWVVALP LSYVLAFPMG
MDAVGVWIGL LAGLSIAAVL LTWRFFRRVK RVDLFTGSIV SDAPIG
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