Gene Slin_6493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6493 
Symbol 
ID8730279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7876686 
End bp7877714 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content49% 
IMG OID 
ProductUDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase 
Protein accessionYP_003391249 
Protein GI284041319 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000851413 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.42329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTA CAGTCAAGCA GATTGCCACA CTGCTGGGGG GCGAAGTCGC CGGAAATGAT 
ACATTGGCAA TCACGGGATT AGCCAAAATT GAAGAAGGAA AGCCAGGCGA TATTTCGTTC
CTGTCGAATC TTAAATATGA ACCGTTTCTG TATACAACTC AGGCATCGGC GGTGATTGTT
GATCGTTCGT TTCAGCCGAA AAAGCCTGTT TTGTCCTCCC TGATTTTTGT GGAAAATTCC
TACTCAGCCT TTACGCAGCT GCTGGAGGAA TACTATAAGC AACTGAGTTT TGCCAAAGCA
GGAGTCGAGC AGCCATCCTA CGTGGGTGAG GGCTGTCAGA TTGGCGATCA GATCTACCGG
GGTGCTTTTT CGTACATCGG ACAGAACTGC CGGATTGGGC GGAATGTGAA GATACATCCA
CATGCGTATG TTGGCAACAA CGTCTGCATT GGCGACAACA CCATCATCCA TCCCGGTGCC
CGTATTCTCG ACGACTGCGT TATCGGAAAA AGCTGCGTGA TCCATCCCAA TGCTGTTATC
GGCAGTGAAG GGTTTGGATT TGCTCCTCAG CCCGATGGTA CCTACAAGAC CATTCCGCAG
CTGGGCAACG TGATCCTAGA AGATTTTGTC AATGTCGGTT CAAACACAAC CATCGACTGC
GCTACCATGG GCTCTACCAT TATTCGCAAA GGGGCTAAAT TGGACAACCT GATTCAGATC
GGGCATAATG TCGACATTGG TGAGAACACG GTCATTGCCG CACAGACCGG TATTTCGGGG
TCGACGAAGC TTGGTCAGAA CTGCGTTATC GCCGGACAGG TTGGCTTTGC CGGTCACCTG
ACCATTGCCA ACGGCACCAA AGTGGGTGCT CAGTCGGGCG TTGGTAAAAA TGTGTACGAA
GAAGGAACAT CCCTCAATAG TTCGCCTGCT TTCGGTCTGA AAGAAAGTAT GCGTTCATTA
GCCATATTCC GGAAATTGCC GGCCCTCGAA CAACGGCTGA CGAATCTGGA AAAGAAAAAC
GCAAAATAA
 
Protein sequence
MKFTVKQIAT LLGGEVAGND TLAITGLAKI EEGKPGDISF LSNLKYEPFL YTTQASAVIV 
DRSFQPKKPV LSSLIFVENS YSAFTQLLEE YYKQLSFAKA GVEQPSYVGE GCQIGDQIYR
GAFSYIGQNC RIGRNVKIHP HAYVGNNVCI GDNTIIHPGA RILDDCVIGK SCVIHPNAVI
GSEGFGFAPQ PDGTYKTIPQ LGNVILEDFV NVGSNTTIDC ATMGSTIIRK GAKLDNLIQI
GHNVDIGENT VIAAQTGISG STKLGQNCVI AGQVGFAGHL TIANGTKVGA QSGVGKNVYE
EGTSLNSSPA FGLKESMRSL AIFRKLPALE QRLTNLEKKN AK