Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6493 |
Symbol | |
ID | 8730279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7876686 |
End bp | 7877714 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | UDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase |
Protein accession | YP_003391249 |
Protein GI | 284041319 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000851413 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.42329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTA CAGTCAAGCA GATTGCCACA CTGCTGGGGG GCGAAGTCGC CGGAAATGAT ACATTGGCAA TCACGGGATT AGCCAAAATT GAAGAAGGAA AGCCAGGCGA TATTTCGTTC CTGTCGAATC TTAAATATGA ACCGTTTCTG TATACAACTC AGGCATCGGC GGTGATTGTT GATCGTTCGT TTCAGCCGAA AAAGCCTGTT TTGTCCTCCC TGATTTTTGT GGAAAATTCC TACTCAGCCT TTACGCAGCT GCTGGAGGAA TACTATAAGC AACTGAGTTT TGCCAAAGCA GGAGTCGAGC AGCCATCCTA CGTGGGTGAG GGCTGTCAGA TTGGCGATCA GATCTACCGG GGTGCTTTTT CGTACATCGG ACAGAACTGC CGGATTGGGC GGAATGTGAA GATACATCCA CATGCGTATG TTGGCAACAA CGTCTGCATT GGCGACAACA CCATCATCCA TCCCGGTGCC CGTATTCTCG ACGACTGCGT TATCGGAAAA AGCTGCGTGA TCCATCCCAA TGCTGTTATC GGCAGTGAAG GGTTTGGATT TGCTCCTCAG CCCGATGGTA CCTACAAGAC CATTCCGCAG CTGGGCAACG TGATCCTAGA AGATTTTGTC AATGTCGGTT CAAACACAAC CATCGACTGC GCTACCATGG GCTCTACCAT TATTCGCAAA GGGGCTAAAT TGGACAACCT GATTCAGATC GGGCATAATG TCGACATTGG TGAGAACACG GTCATTGCCG CACAGACCGG TATTTCGGGG TCGACGAAGC TTGGTCAGAA CTGCGTTATC GCCGGACAGG TTGGCTTTGC CGGTCACCTG ACCATTGCCA ACGGCACCAA AGTGGGTGCT CAGTCGGGCG TTGGTAAAAA TGTGTACGAA GAAGGAACAT CCCTCAATAG TTCGCCTGCT TTCGGTCTGA AAGAAAGTAT GCGTTCATTA GCCATATTCC GGAAATTGCC GGCCCTCGAA CAACGGCTGA CGAATCTGGA AAAGAAAAAC GCAAAATAA
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Protein sequence | MKFTVKQIAT LLGGEVAGND TLAITGLAKI EEGKPGDISF LSNLKYEPFL YTTQASAVIV DRSFQPKKPV LSSLIFVENS YSAFTQLLEE YYKQLSFAKA GVEQPSYVGE GCQIGDQIYR GAFSYIGQNC RIGRNVKIHP HAYVGNNVCI GDNTIIHPGA RILDDCVIGK SCVIHPNAVI GSEGFGFAPQ PDGTYKTIPQ LGNVILEDFV NVGSNTTIDC ATMGSTIIRK GAKLDNLIQI GHNVDIGENT VIAAQTGISG STKLGQNCVI AGQVGFAGHL TIANGTKVGA QSGVGKNVYE EGTSLNSSPA FGLKESMRSL AIFRKLPALE QRLTNLEKKN AK
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