Gene Slin_6456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6456 
Symbol 
ID8730241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7827437 
End bp7828645 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content55% 
IMG OID 
ProductMembrane dipeptidase 
Protein accessionYP_003391212 
Protein GI284041282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCCTA TTGTTCTGTC GAGTCTGCTC GCACTGAGTT CATTCATAGC TCATTCGCCC 
GGCGATGACG ATAAGCTTAC GAAAAAAGCC CGCAAAATTC ACCAGCGCGT GCTGACGCTC
GATACCCACG CCGATGCGCC AATCATGATG CAAAAGCCCG GTTTCGACGT GGGCACGTCG
CACGATACCA AACGCGATGG CTCGCAGATT GACTTTCCAC GGATGAAAAA AGGGAGCATG
GACGCCATGT TCTTTGCCGT ATATACCTCA CAGGGGCCCC GCACCGACGA AGGCCATGCC
GAAGCCAAAC GCAATGCTCT GAATCAGTTT GAGTTGATTC ATCAGGCCCT GAAAAAATAC
CCCAATCTGG CCGAACTGGC TACTACGCCC GCCGATGCCT ACCGAATCAA AAAAGCCGGG
AAACGGGCAG TATTTATCGG GATGGAAAAC GGTTACCCGG TCGGGAAAGA CCTGTCGATG
CTCAAGACCT ATTATGATCT GGGCTGCCGC TACATGACCT TGACCCACTT CGCCAATAAC
CTCATCGGCG ACTCGTCTAC CGACCCCGAC GGCCCTATGT ACGGCGGATT GAGCGATTTC
GGGAAGCAGG TTGTGCCGGA AATGAACCGG CTGGGAATTC TAATCGACGT GTCGCACGTG
GCCGACAGCA CCTTTTATGA CGCCCTGGCT CTCTCGAAAG CACCCGTCAT CGCGTCGCAC
TCTAACTGCC GGGCGCTGTG CGACTTTCCG CGCAACATGA CCGACGATAT GATCAAAGCC
ATTGCCGCCA AAGGGGGCGT GGTACAGGTC AACTTCGTGA GTGATTACTT AAAGAAGCCT
TCCGACGCCA ACCGGGCCGC CAAAACCAAA ATCCGTATGG CGCGGGTCGG TAAAGTCGTG
ACGCCGGAAA TGGAAGCCCG GATGACGGCC ATGAGCGACT CCGTATCCAA GGTATATGCG
GCAGAGCGGG CCAGTCTGTC GGATATTGTC GATCATATCG ACCACATCGT TAAACTGGTG
GGTATCGACC ACGTAGGTAT CGGTTCGGAC TTTGATGGGG GCGGGGGCGT TAATGGCCTC
GAAGACGTGA GTGAAATCGA GAACCTGACC GTCGAACTTG TCCGCCGAAA TTACTCCGAA
GCCGACATTG CTAAAATCTG GGGTGGTAAT CTGCTGCGGG TTCTGGGACA GGCTAAGGTT
GGGAAGTAG
 
Protein sequence
MLPIVLSSLL ALSSFIAHSP GDDDKLTKKA RKIHQRVLTL DTHADAPIMM QKPGFDVGTS 
HDTKRDGSQI DFPRMKKGSM DAMFFAVYTS QGPRTDEGHA EAKRNALNQF ELIHQALKKY
PNLAELATTP ADAYRIKKAG KRAVFIGMEN GYPVGKDLSM LKTYYDLGCR YMTLTHFANN
LIGDSSTDPD GPMYGGLSDF GKQVVPEMNR LGILIDVSHV ADSTFYDALA LSKAPVIASH
SNCRALCDFP RNMTDDMIKA IAAKGGVVQV NFVSDYLKKP SDANRAAKTK IRMARVGKVV
TPEMEARMTA MSDSVSKVYA AERASLSDIV DHIDHIVKLV GIDHVGIGSD FDGGGGVNGL
EDVSEIENLT VELVRRNYSE ADIAKIWGGN LLRVLGQAKV GK