Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6394 |
Symbol | |
ID | 8730178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7748045 |
End bp | 7748752 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | peptidase M22 glycoprotease |
Protein accession | YP_003391151 |
Protein GI | 284041221 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0429104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTCA TTCTTTCTCT CGATACATCA ACGGCCATCT GTTCAGTAGC TCTGCACAGC ACCGAAGGTT CACTCAGCAG TTCACTGCTC GGCTCCTATG AGCTCTTTAC AGAACGAACC TCTTCCGCTA TGCTCACAAC GCTCATCAGC GATATTGTGC GACAGGCAGG TTATGAGCTA ACCCAGCTTG ATGCTATCGC TGTAGCCAAA GGACCTGGCT CTTACACGGG GTTGCGCATT GGAGTTTCGA CAGCAAAAGG ACTTTGCTTT GCGCTGGATA AACCTCTACT GGCCATCAAT ACGCTAACGG CTATGGCCGA ACAAGTCCGT TCTTTCTACC CCACAGACTA TATACTGTGC CCTATGATTG ATGCCCGCCG TATGGAAGTC TACTGCGCCC TATACAATAC AGATGGGCAG GAAATGCAGC CAACGACGGC ACAGATTATT GATGAGCAAT CATTTGACGA GTGGCTGGCA CAGAAGCCCG TGGTCTTTTT TGGTGATGGA GCCGCAAAGT GCGAAGCCCT GCTAGGCGGT CATGTCAACG CCCATTTTCC TACGATACCG ATCCATCCTT CGGCCAGAAC CGTTGGGCAG TTGGCCATCG TAGCCTATGC CCGCAGCGAA TTTGAAGATA CCGCTGCCTT TGAGCCCTTT TACCTGAAAG ATTTTATGGC CATAAAGCCT AAAAAGGCCC CGTTTTAG
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Protein sequence | MPLILSLDTS TAICSVALHS TEGSLSSSLL GSYELFTERT SSAMLTTLIS DIVRQAGYEL TQLDAIAVAK GPGSYTGLRI GVSTAKGLCF ALDKPLLAIN TLTAMAEQVR SFYPTDYILC PMIDARRMEV YCALYNTDGQ EMQPTTAQII DEQSFDEWLA QKPVVFFGDG AAKCEALLGG HVNAHFPTIP IHPSARTVGQ LAIVAYARSE FEDTAAFEPF YLKDFMAIKP KKAPF
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