Gene Slin_6317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6317 
Symbol 
ID8730101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7666818 
End bp7667990 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content57% 
IMG OID 
Productfumarylacetoacetase 
Protein accessionYP_003391075 
Protein GI284041145 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACG GCGTTTTCAG TTACGACATT GCCAGCCCCC GCGTGGGTGT ACATCATAAA 
AACTTCGTTC TCGACCTCGA AGTGGTGAGT TTACTCGGTT ATTTCGATGA TTTATCCGTC
GACCCCACCG TGTTTGCCCA ACCGGCGCTG AACGACTTTA TTGCCTTGGG CAAACCGGCC
CACCGCGCTA TCCGGCAACG ATTAACCGAG TTGCTGGATA AGGACGTCCT TGCGCTGGCC
GATGTTCACG ACCAGGTTTT TATTCACGAA TCGCGGGTGA AAATGCACTT GCCCGTTCGT
ATTGGCGACT ATACCGATTT TTACGTGGGT ATTCACCACG CCGAAAATGT AGGCCGTATG
TTCCGCCCTC AGGGCGACCC GCTCCTGCCC AATTACAAAC GGCTCCCCGT AGGCTATCAC
GGCCGGGCCT CGTCGATTGT TGTATCCGGC ACGCCCGTCC GACGGCCCAG CGGCCAGTTT
ATGGATGACG GACAATTGAC ATTTGGCCCG TCGAAGGCGC TGGATTTCGA ACTGGAACTG
GCGCTCGTTA TCGGCAAAGA AAATCCACTC GGTGAACCTG TTCCGGTGGA AGAAGCGGAA
GATTATATTT TTGGGGTTGC GTTGTTCAAC GACTGGTCGG CGCGCGATAT TCAACGGTGG
GAATACCAGC CCTTGGGACC GTTTCTGGGC AAGAACTTTG CGTCGAGCTT GTCGGCCTGG
GTATTGCCGT TCGATGAGCT GGAGCCGTTT CGGATGGCGG GAATGCCGCA GGACCCGACG
CCCCTACCCT ACCTGCAAAC CCATACGCCG GGCCATTTCG ATCTTGAACT GGCCGTGTCA
TTCCAGGCTG CCGATGGCGA GACCGTCTGC ATTTCCCGCT CCAACACCAG GTACCTGTAC
TGGACCTTCG CCCAGTTGAT TGCCCATCAT ACGGTTGGCG GCTGCAACCT CCGCATTGGC
GATCTGCTGG CCACCGGCAC CATCTCCGGC GACATGCCCG GCAGTTACGG CTCACTGCTG
GAACTGAGCT GGAACGGCGA ACGCCCTCTT CATTTATCCC ACACAACCAC CCGCACCTTT
CTGGCCAACG GCGATACCGT AACCCTACAG GGGCATGGAT TCAAAAACGG CGTACGCGTT
GACCTTGGCG AGGTTACGGG AACAATAGTT TAG
 
Protein sequence
MLYGVFSYDI ASPRVGVHHK NFVLDLEVVS LLGYFDDLSV DPTVFAQPAL NDFIALGKPA 
HRAIRQRLTE LLDKDVLALA DVHDQVFIHE SRVKMHLPVR IGDYTDFYVG IHHAENVGRM
FRPQGDPLLP NYKRLPVGYH GRASSIVVSG TPVRRPSGQF MDDGQLTFGP SKALDFELEL
ALVIGKENPL GEPVPVEEAE DYIFGVALFN DWSARDIQRW EYQPLGPFLG KNFASSLSAW
VLPFDELEPF RMAGMPQDPT PLPYLQTHTP GHFDLELAVS FQAADGETVC ISRSNTRYLY
WTFAQLIAHH TVGGCNLRIG DLLATGTISG DMPGSYGSLL ELSWNGERPL HLSHTTTRTF
LANGDTVTLQ GHGFKNGVRV DLGEVTGTIV