| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6307 |
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| Symbol | |
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| ID | 8730091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7656441 |
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| End bp | 7658759 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | capsular exopolysaccharide family |
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| Protein accession | YP_003391065 |
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| Protein GI | 284041135 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.6836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA ATCAGTATAC TAATTCGACG CCAAATAAGC CCGTAAATAT ACGCTTATTT
TTTTCGAAGT ATTTACGCAA CTGGTACTGG TTTGTTATTG CTTTGGTAGC TGCCTTAGGT
GGTGCCTATT ATTACCTTCG GAATACGACA CCGGTTTATC AAGTCAACGC AGCCATTCTT
ATCAAAAAAG AAGAGAAAGG TATGATTGGC GACGATATTA TAAAGAGTGA AAATACGAAG
GTAAGCGAGA AAAATATCGA GAACGAAATT GAAACATTAA AGTCACGCAC ATTAATTCAG
CGAGTGGTCG ATGATTTGAA TTTGACCGTT GGTTATTTTC AAAAAGGAGA CGTTCGGGAC
AATGAAGAAA TTTATGACGA ATCGCCTATT CATGTTCGGC CCATTAAATT AAATGCGGCT
GCTTATGCTG GTCTTATTTC GGTTCATATT TTAAATCCAA AGCAGTACGA ATTACTGGAT
GAGGAAGGCA AAACCAAGGG CAAATACAGT TTTAATCAGC TGGCAAAAAG CGATTATGGT
ACGTTTAACA TAACGTATAT CGATTCGCTG TACAACCCCG CAAAAAATGT AATCAAGGTT
GCATTTTATG ACAAAGAAGT AACAGTTCAG CAGTATCAAT CAGCCGTTAA AGTAGAACTG
AACAACCAGA AGAGCACGGT ACTGAAATTG GGTATGGAAA CGCCCGTACC ATCGAAGGGG
AAAGCGGTTT TGGGCAAATT GATGGACGAA TACACTTTTG CGGCTCTGGC CGATAAAAAC
AAGGAAGCGG CCAATACCAT GCAGTTTATC GATGAGCGCC TGCGCCTGAT TACCGGTGAA
CTGGGTAACG TCGAAAAAAA TGTTGAATCG TACAAAAGTC AGGCCGGCAT AACCGATTTA
AGCACCGAAG GAAACCTGTT TCTGGAATCG GTAAAGGACA ACGACGCCAA ACTGAATGAT
GTTGAAATTC AGCTCAGGGT ATTGAACGGG GTTGAATCGT ATTTAAAGAA TAGCCAGAAC
GGCGTGGCAC CCGCTACGGC CATGGGCAAC GATGCGGTAC TGGGTGGTCT GTTAAAGAAA
CTCAGCGACC TGGGTTCGCA GGAAGAGAAA TATAGCCGGA CAACGCAGCC AGATAACCCT
TACCGGCAAA CAATTGAAGC ACAAATTGCC AGCACGAAAG CCTCTATCCG GGACTACGTT
AATAACCAGC GGCAGAATTT GCTTGTAACG CAAAGCAGCC TGAAACAACA GAATGGCCGT
TTTAACTCGT CTATCCGAAC CATTCCCCGC AAGGAGCGCG AGTTTGTAAA CATCAAGCGC
CAGCAGGCCA TTAAAGAAAA TCTGTACCTT CTGCTGCTCC AGAAAAAAGA GGAAACCGCC
ATTGCCCACG CGCCCACGAT TACAGACAGC CGGGTTATGG ATGCACCTTA CAGCTCTCCG
GGTCCCGTTA AGCCAAACCA CAGCAGCATT TACATGCTGG CCGTTTTTGC TGGCTTGCTG
ATTCCGGCCG GGTTTATCAG CGCCCGTGGC CTGATGAACG ACAAAGTGCA GTCGCGGAAA
GAGATCGAAG AAGAAACGGG GGTTGTCGTG TTCGGCGAAA TCACCAAAAA ACCAAAGCAG
CTTAAGAACA ACATCGTCGA TCTGACCAGC CATTCGCTCA TTGCCGAGCA GTTCAAAATT
CTGCGGGCCA ATTTGCAGTA TGCCGGCCGG GAAGACGGTA ACCCTGACGG GCAGGTGATT
CTGATCACCT CATCGGTTAG TGGTGAAGGC AAGAGTTTTG TGAGCATCAA CATGGCGCTG
AGCCTCGCAT TGCTCAACAA AAAGGTGATC GTGCTGGAAC TGGACCTGCG TAAGCCTCAA
ACGGCTCAAT ACCTGAACAT GACTCAGCTC GACAAGCCGG GTATTTCCAG CTACCTGGAT
GGCCGGATCG GATACGATCA GTTAATTCAG CAAACGCAGG TTCACCCCAA TCTGTATTTC
ATAGCAAGCG GCCCGATTCC CAATAACCCA ACGGAGCTGC TGTCGAACGG ACGTATTCAG
GTGTTGCTCG ACCAGCTGCG AAGCGAGTTC GATTACATTG TTCTGGATAC GCCCCCGGTA
AGTATGCTGG CCGATGCCAC GCTGCTGGGA CCCTACGCGG ATACCGCTTT TTACGTTGTC
CGCCACGAGT ACACGCCACG CAATTACATG CGTTTGCTGT CCAATTTAAA CGACAGCCAC
AAGTTCAAAT CGCTGAACGT CATTGTCAAC GCCGTCAACT ATCCCAACAG TGAGGATTTC
GGCTATGGGT ATAGCTACCC GAAGCGCAAA GCGTACTAA
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| Protein sequence | MIDNQYTNST PNKPVNIRLF FSKYLRNWYW FVIALVAALG GAYYYLRNTT PVYQVNAAIL
IKKEEKGMIG DDIIKSENTK VSEKNIENEI ETLKSRTLIQ RVVDDLNLTV GYFQKGDVRD
NEEIYDESPI HVRPIKLNAA AYAGLISVHI LNPKQYELLD EEGKTKGKYS FNQLAKSDYG
TFNITYIDSL YNPAKNVIKV AFYDKEVTVQ QYQSAVKVEL NNQKSTVLKL GMETPVPSKG
KAVLGKLMDE YTFAALADKN KEAANTMQFI DERLRLITGE LGNVEKNVES YKSQAGITDL
STEGNLFLES VKDNDAKLND VEIQLRVLNG VESYLKNSQN GVAPATAMGN DAVLGGLLKK
LSDLGSQEEK YSRTTQPDNP YRQTIEAQIA STKASIRDYV NNQRQNLLVT QSSLKQQNGR
FNSSIRTIPR KEREFVNIKR QQAIKENLYL LLLQKKEETA IAHAPTITDS RVMDAPYSSP
GPVKPNHSSI YMLAVFAGLL IPAGFISARG LMNDKVQSRK EIEEETGVVV FGEITKKPKQ
LKNNIVDLTS HSLIAEQFKI LRANLQYAGR EDGNPDGQVI LITSSVSGEG KSFVSINMAL
SLALLNKKVI VLELDLRKPQ TAQYLNMTQL DKPGISSYLD GRIGYDQLIQ QTQVHPNLYF
IASGPIPNNP TELLSNGRIQ VLLDQLRSEF DYIVLDTPPV SMLADATLLG PYADTAFYVV
RHEYTPRNYM RLLSNLNDSH KFKSLNVIVN AVNYPNSEDF GYGYSYPKRK AY
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