| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6292 |
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| Symbol | |
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| ID | 8730076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7637812 |
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| End bp | 7641756 |
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| Gene Length | 3945 bp |
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| Protein Length | 1314 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | PA14 domain protein |
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| Protein accession | YP_003391050 |
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| Protein GI | 284041120 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.237878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAGGT TAAAAACGAG TAAGGCAATA GTACTCCTGC GGGTAAGTCT GGTTCTTTTT
GTTCTGTTGC CGATGCTGGC AGCAGCTCAG CCCAAGGACA GAATCCCCTT CTCGTTTACC
CTGAAAACGG CGGCCCGGAC CAGTGCGGGT GTGTTCTCCA AAGACAGCGT ACTGCTCCGG
ACCCTCTGGA GCGGGGTCGA CTATCCGGCG GGTTCTCATC AGCAGACCTG GGACGGCCTC
GACGATGAAG GTCGGCTTAT TGCCGAAGGC AGTTACGACA TCCGGGTACT ATCGAACAAT
GTAAAGTACA CCTGGGAGGG CGTTATCGGC AACTCATCCT TTGGCATCAG TAAGGGAAAC
AACACACACC GGGCTTTTCT GCGGATGCAG AGTATGGCCA TTAGCGGCAC CAACGCGTAC
TTTGGCGTGG GCTATGCCGA AGGGCATCCC TCACAGGCCA AATTTACCGT CGACAATCCG
CAGTCACGGA TCGAGTTTTC GCCGAAAGGC GAGACGGCTC AGGCCACGCT GTTTACCGCT
ACCGATGGTA CTACCGTCTA CTGGGCCGGA TACGATGGCC CCGGCAATGG AAACAGCTGG
TTTATTTATG GCACCAATAC CATTGATGAT AAAGAGAAGT TTTTTTCAAG GGGCACTCCG
CTCAAGACGA CCTTGGGAAA AACGTACGTC TCCTGTCTGG ATATAATCCG GGAAACCAAC
GGCACCATCA CGGGCCTTGC CGTCCAGAAA AATGGTAACT ACCTGTTCGT GTCGCATAAG
GCAAAGCACC AGATCCGGGT TTATAACAAA ACGACCGGTG CGCTGGTCCA AACGCTCTTT
TTCAACGACG CGGCCGGGCT GGCCGTTGAT GGGCAGGACC GGCTGTGGGT CATCAACGGC
GTAACGGTAC GCAAATACAC CGTGGAGACC GATGGCAATC TGACCGAGAC GAAGGTTTCC
CTGCCGGGCC TGGAACGGCC GATGGCGCTG GCCGTCTCGC CCGACAACGG CACCGTCCTC
GTGGCCGATG GTGGGGAAAG CCAGCAGCTA AAAGCGTATA ATAACGTAAG TGGCGTATCG
AGCTGGACGC TGGGTCAGCC GGGCGGGTAC GCAACCGACC CCACGGTGAG CAATGACAAG
TTCTACTTCT CGGACGTAAG CGGGACGATC AACGATACGT TCCTGGCCTT TCAGGCCGAT
GGGTCGTTCT GGGTGGGCGA TTCGGGCAAC TACCGGGCGC AGCATTATTC GGCCAGCCGC
ACCTTCATCG ATCGGATTCA GTACATGCAG CACTCCTATA GCTCGGGAGT CGACCAGAAC
AACCCCCGGC GGGTGTTTTG CCAGTACCTC GAATTCGATG TCGACTATAC CAAACCACTG
GCCTCTGCCT GGACGCTGGT CAAAAACTGG CGGGCGTCGA TACCGGGCGA CTATTTTGAC
GAGCAGAATA TCAATCACAC CTTCATCACC GATGTATTCA AGTCGGTAAC GACCCTTAGC
AACGACCGGA CCTACGGGTT GCTGAAGCAG ACAAAAACAA AAAAGTGGAG TCTGGTCGAA
CTACCCAAAA ACGGCCCCGT TCGCTTTACG GGTGTCACCT TCGACGATGC CCAGTATTAC
CTGGCACCCG ATGGTTCGCT GAACCAGGCC ATCAGCCAGC CCAGCGGAGT GGGTGGCAAC
ATCCGGTGGC AAAAGAAGCT GCTGGCGGGT TTCGATCCGC AGAATAATCC ACTCTGGTCG
CCCGCCCTCC GGACCGCCAG CATCCCGGTT ATCAGCGCTA CAGACCCTAT CGATTTCACC
GGTTATGGCA GTATGCGTCC CGGATTGACC ACCGCTAACG GCACGGTGGT ATCGTTCAAT
AAAAACAAGG TAAGTTCCGA CAAATCGAAC GGATTCGGTT TTCATCTGGG TGGTATCAAA
CCCGGAACTA CTAACTGGGC CTGGAAAACA GCCTACGCCA CTACAGAAGA CTATACCGGC
AACTTCCCGC CCGACGGGGC GTACGATGTG GGCAACAGCG TTGAGTATGG TGGGGGCGAT
GTAACCGTAA GCGGTCGGCA TATTTTCTGG TCTTACCACG GCGAATTCTG GAAGAACAGC
CAGACCAACA AATGGAACCA TGTGTATGAA AACGGCCTAT TCGTTGGTCA GTTTGGCGTA
CTCGGAACCG AAGCCAACGG TCAGGCCGCT TTTCCAGGCA TGGCGGGTAA CGTGCTCTAT
GGCACCGCAG TTGCCGGGTC CGACGGGTCC ATCTACATCT GGCATGCCGA AGAAGCGGGG
CATAGTGGTG TGCATCGCTG GAAAGTAACA GGTCTGGAAA CGATTCAGCA ACAGTCGATC
CCGGTTTCGC TCATGCGAAC GCGGCCCAAT GGCCTGCTTG GAACATACGC GGAAGGAACC
GACCTCAACA ACGCCAACGC CCGGCTCATC CAGGTCGATA AGCTGGTCAA CGTGACCTGG
TCTGAAAGCC CCATTGGCGC AAGGCTATCG GCTTTACCGA GCTTTTCCGT ACGGTGGAGC
GGCTTCATTA CTCCCCAGTA TTCGGAACAG TACACGTTTT ACGTGAACGC CACTAAAGGC
GTGCGGCTCT GGATCGACAA TAAACTGCTG ATCGACCAGC CCACTACCAA TGGTTCGACG
GAGTACAACG GCAGCATTTC GCTGGATGCC CACAAACAAT ACACGGTTCG TCTGGAGTCA
TATGGCGGTA GTGGAGCCAT TTTTTCGTGG TCGAGCAAAA GCCAGTCGAA AGAGATTGTC
CCCTCGAAAT ACCTGTACCC ACCCGTTGAA ACGGATACGA CCCATGGTAT CGACTTGCTG
GAAGGCCTTA CGGCCAGCAG TATTCTGACG AACGACCTGT ATGGCTGGAA GCGAAGTCCG
GCGCAGGAAG ACTACTCCGA CCCGAACGCC AAGTTCTGGA CCGCCCGTAC AACCATCAAA
AAATACGACC GGTTTACGTC GCCGGACCTT TTCATCTGTT TCAGGCAGAA CAGCGGCAAT
TACAGCATTA CCCGTAGCCT GGGCAACAGC ACCAATCTGA GCACCAGCTG GCGACTACAG
GGGGTCATTA ATCAGGAGGG GAACTTTTTC AGCATTGATG AGGGCCGCAA TCGAAACGGC
GGCAGCTACA TCGAACTGCT CGACGACGCT GATAAGGTCA TCTCCCGCAT CAACTGCCAG
GTTACCATGA ATCCTACGCC CATTGGCAGG ATTTACGGCA ACGACAAAGT CATTGCGCAG
GGCGACTACA ACAATGTGAT CTCACCGATC TTCAACAGTG CCCAGCCCCT CGATATAACG
ATGGTAAATG GCACCGCCGT TATCAAATAT GGTCCCTACA ATGCCGTCAG CGCATCCGTT
CTGGACCCGG CGGCCAACTG GCACAAGCCC CGAACCCTGC GCATCTATTT TTGGGGGAAT
GGGTACAATG TCAACCGGGT TGTTGATATC GAACAGATGC GTTTTTACGC CAATAACTCG
CCATCGGTTG TATTGCTTAA GGCCGACGAT GAGGCCAATA CCCTCGCAGC GACTACCCCA
TCGGTACAAT ACAGAATTCT GGTAAGCGAA AATGGCGGGC CTTATCTCCC CTACACCGGG
GTCATTAACG TGGGAAATCA GACGCGTCCT GAAGGGTACT GGAAATTTAA GTTAGATGCA
CCGGGGGGCG AAGTTGTTAA CAGTCCAGCC TTCACGGCAT CGGCAGATAT CAAATTCAGC
GTTTACCCGA ATCCTACACA GGGCATTCTT TACATCAATC ACCCCATCGT TGAGGGCGAT
TGCAAACTTA GGGTATTCGC TCCCGATGGA AGGGAAATAA CCAGTTGGGT TCCGGCAACG
GGTACGTCGG ATTCGGCAGT CGATGTCAGC ACCTTTGTAA AGGGGACTTA CGTACTGCAA
TTTCAAAAAA ATCACACAAG CGTGTCGACC CGCTTTATAC GGTAG
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| Protein sequence | MGRLKTSKAI VLLRVSLVLF VLLPMLAAAQ PKDRIPFSFT LKTAARTSAG VFSKDSVLLR
TLWSGVDYPA GSHQQTWDGL DDEGRLIAEG SYDIRVLSNN VKYTWEGVIG NSSFGISKGN
NTHRAFLRMQ SMAISGTNAY FGVGYAEGHP SQAKFTVDNP QSRIEFSPKG ETAQATLFTA
TDGTTVYWAG YDGPGNGNSW FIYGTNTIDD KEKFFSRGTP LKTTLGKTYV SCLDIIRETN
GTITGLAVQK NGNYLFVSHK AKHQIRVYNK TTGALVQTLF FNDAAGLAVD GQDRLWVING
VTVRKYTVET DGNLTETKVS LPGLERPMAL AVSPDNGTVL VADGGESQQL KAYNNVSGVS
SWTLGQPGGY ATDPTVSNDK FYFSDVSGTI NDTFLAFQAD GSFWVGDSGN YRAQHYSASR
TFIDRIQYMQ HSYSSGVDQN NPRRVFCQYL EFDVDYTKPL ASAWTLVKNW RASIPGDYFD
EQNINHTFIT DVFKSVTTLS NDRTYGLLKQ TKTKKWSLVE LPKNGPVRFT GVTFDDAQYY
LAPDGSLNQA ISQPSGVGGN IRWQKKLLAG FDPQNNPLWS PALRTASIPV ISATDPIDFT
GYGSMRPGLT TANGTVVSFN KNKVSSDKSN GFGFHLGGIK PGTTNWAWKT AYATTEDYTG
NFPPDGAYDV GNSVEYGGGD VTVSGRHIFW SYHGEFWKNS QTNKWNHVYE NGLFVGQFGV
LGTEANGQAA FPGMAGNVLY GTAVAGSDGS IYIWHAEEAG HSGVHRWKVT GLETIQQQSI
PVSLMRTRPN GLLGTYAEGT DLNNANARLI QVDKLVNVTW SESPIGARLS ALPSFSVRWS
GFITPQYSEQ YTFYVNATKG VRLWIDNKLL IDQPTTNGST EYNGSISLDA HKQYTVRLES
YGGSGAIFSW SSKSQSKEIV PSKYLYPPVE TDTTHGIDLL EGLTASSILT NDLYGWKRSP
AQEDYSDPNA KFWTARTTIK KYDRFTSPDL FICFRQNSGN YSITRSLGNS TNLSTSWRLQ
GVINQEGNFF SIDEGRNRNG GSYIELLDDA DKVISRINCQ VTMNPTPIGR IYGNDKVIAQ
GDYNNVISPI FNSAQPLDIT MVNGTAVIKY GPYNAVSASV LDPAANWHKP RTLRIYFWGN
GYNVNRVVDI EQMRFYANNS PSVVLLKADD EANTLAATTP SVQYRILVSE NGGPYLPYTG
VINVGNQTRP EGYWKFKLDA PGGEVVNSPA FTASADIKFS VYPNPTQGIL YINHPIVEGD
CKLRVFAPDG REITSWVPAT GTSDSAVDVS TFVKGTYVLQ FQKNHTSVST RFIR
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