| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6260 |
|---|
| Symbol | |
|---|
| ID | 8730044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 7594571 |
|---|
| End bp | 7595896 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | restriction modification system DNA specificity domain protein |
|---|
| Protein accession | YP_003391018 |
|---|
| Protein GI | 284041088 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATGA TTGCTGAGCA ACCTATACAA ACGAATCGTT ACCCTCAATA TAAAGACTCC
GGCCTCGAAT GGATTGGTGA GATTCCGGCG CATTGGGAGG TCGGTCGAAT CAAATATGTA
TGTAAAATAA ATCAACGCTC ATTACCAGAA AGTACGGCTA AAAGTTTTCC AATTCATTAT
GTTGACATTG GAAGTGTCAC ACTTGAAGAG GGTATAGTTC AAACGGAGGA GTTTGAGTTT
AAGAATGCAC CTTCAAGAGC AAGGCGGATT GCAAACGCAG GTGATACAAT AATTTCAACA
GTTCGGACAT ATCTAAAAGC AATTGCCTTT GTTGATGAGC AACAGAGTCA ATTCATTTAT
TCTACTGGAT TTGCAGTGCT TAATCCGTTG CCGTTAATAA TGCCCAAATT TTTGGCGATG
GCTGTAAAAA GTGATTCGTT CACCGAACAA GTTTCTGCCA ACTCTAAAGG CATGAGCTAT
CCTGCAATTA ATTCGACTGA ACTTGGTTGT CTTGCAATTT GCTTCCCTCC CCTCTCCGAA
CAAACCCGCA TTGCTGAATT TTTAGACCGC AAAACGGCGC AGATTGACCA GGCCATTGCT
CAGAAAGAAC AGCTCATCGA GTTGCTCAAC GAACGGCGGC AGGTGATGAT TCACCGGGCC
GTTACGCGCG GGCTAAACCC CAATGCACCC ATGAAAGACT CGGGTATTGA CCGGGGCGAC
GCTCGCTGGA TTGGCGAGAT ACCAGCGCAT TGGGAGGTAA GTCGTATCAA CTGGTTGTTT
ACAGAGAAGG ACGAGACAGG CTACCCCGAC CTGCCTTTAC TCATTGTCTC CATCAACTCA
GGCGTAACTG TTAGAGATAT GGATGATACT GAAATTCGAA AGCAAGTAGC CGAAGATTTC
AACGTGTACA AAAGAGCGTT AGCCGGTGAC ATTGCCTTCA ATAAAATGAG AATGTGGCAG
GGAGCTGTTG GTGTAGTGCC GCAGGATGGA TTAGTCTCGC CTGATTACGT TGTCGCACGG
CCAAACAATT TTGTCAATTC AGCCTACTAC GGTTTCCTAT TCAAGACCAG AGAGTATCTG
GCTGAATTTG TAAAACATTC TCATGGCATT GCCTGGGATA GGAATCGCCT ATATTGGGAG
GACTTCAAAT CAATATTTGC TATGGTTCCC CCATTGGAAG AGCAGAATCA AATTGTTGAT
TTCCTAAATG CCCAAAACGA AGAGATGTCC TTTGCATCGA CTAAAATCCA AAAACAGATT
CAGAAGCTTC AGGAACTCAA ATCGACGCTG ATCAACTCGG CGGTAACGGG GAAGATAAAG
GTGTAA
|
|---|
| Protein sequence | MTMIAEQPIQ TNRYPQYKDS GLEWIGEIPA HWEVGRIKYV CKINQRSLPE STAKSFPIHY
VDIGSVTLEE GIVQTEEFEF KNAPSRARRI ANAGDTIIST VRTYLKAIAF VDEQQSQFIY
STGFAVLNPL PLIMPKFLAM AVKSDSFTEQ VSANSKGMSY PAINSTELGC LAICFPPLSE
QTRIAEFLDR KTAQIDQAIA QKEQLIELLN ERRQVMIHRA VTRGLNPNAP MKDSGIDRGD
ARWIGEIPAH WEVSRINWLF TEKDETGYPD LPLLIVSINS GVTVRDMDDT EIRKQVAEDF
NVYKRALAGD IAFNKMRMWQ GAVGVVPQDG LVSPDYVVAR PNNFVNSAYY GFLFKTREYL
AEFVKHSHGI AWDRNRLYWE DFKSIFAMVP PLEEQNQIVD FLNAQNEEMS FASTKIQKQI
QKLQELKSTL INSAVTGKIK V
|
|---|
| |