Gene Slin_6258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6258 
Symbol 
ID8730042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7591096 
End bp7593459 
Gene Length2364 bp 
Protein Length787 aa 
Translation table11 
GC content52% 
IMG OID 
ProductN-6 DNA methylase 
Protein accessionYP_003391016 
Protein GI284041086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCACC AATCCCATAA TAAATTAGTC TCCTTTATCT GGTCCATTGC CGATGATTGC 
CTGCGCGACG TGTACGTGCG GGGTAAGTAT CGCGACGTTA TCTTACCGAT GGTTGTCTTG
CGCCGACTGG ATGCGCTGCT CGAACCGGGT AAAGATGAGG TGATGGAAGA AGTTCGGTTT
CAGCGCGAAG AGGCCGGTTT TACCGAACTG GATGTCAATG GCCTACAGGC GGCATCGGGC
TACGTTTTTT ATAATACCAG TGTCTGGACG CTGCAAAAGC TGCACGATAC AGCCACCAAT
AACCAGCAAT TATTGGAAGC TAACTTCACG GATTACCTCG ACGGCTTCAG CGATAACGTC
AAGGAGATTA TCCGCAAGTT CAACCTGAAG AGCCAGGTGA AGCACATGGC CAATAAGGAT
GTGCTGCTCG ACGTGCTGGA GAAGTTCACC TCACCCACGA TCAACCTGAC CCCTTTTGAA
AAACTGGACC CCGAAGGACG TAAACTACCG GCCCTGTCGA ACTTGGGCAT GGGCTACGTG
TTTGAGGAGC TGATCCGTAA GTTCAACGAA GAGAACAACG AGGAAGCCGG AGAACACTTT
ACGCCCCGTG AAGTCATCGA CCTAATGACC CACGTCATTT TTGAGCCCAT TAAAGACCGG
CTGCCACCCG TTATGACCAT TTATGACCCG GCCTGCGGTT CGGGTGGGAT GCTGACCGAA
TCCCAGAACT TCATAAAAGA TGAAGATGGG CTTATTCGGG CCAAAGGCGA TGTGTATCTC
TTTGGTAAGG AGATCAACGA CGAGACCTAC GCCATCTGTA AGTCGGATAT GATGATTAAG
GGCAATGATC CCGAAAACAT CAAAAACGGC TCTACGCTCT CGACCGACGA GTTTGCTGGA
AAGCAGTTCG ATTTTATGCT CTCAAATCCG CCCTATGGTA AGTCGTGGGC GAGCGAACAA
CGCCATATCA AAGATGGGAA TGAGGTCATC GACAGTCGTT TCCGCATCAA GCTCAAAAAC
TACTGGGGCG TAGAGGAAGA CGCCGATGCC ATTCCACGCT CCAGTGATGG GCAGTTACTG
TTTCTGATGG AAATGGTGAG CAAGATCAAA CCGTTGGCAG CTTCGCCGTC GGGCTCCCGG
ATTGCTTCGG TCCACAACGG CTCCAGCCTG TTTACGGGCG ATGCCGGTGG GGGCGAAAGC
AACATTCGGC GGTATCTGAT CGAAAACGAT TTGCTCGACG CCATCATCCA GCTGCCCAAC
AACCTGTTCT ACAATACAGG TATCACCACC TATATCTGGG TATTGACGAA CAGCAAACCC
GCCAACCGAC AGGGCAAGGT GCAACTCATT GACGCCGGAC CGCTGTACCG CAAGCTGCGA
AAGAACCTGG GGGCCAAGAA CTGCGAACTA GCTCCCGAAC ACATCACCGA AATTGTCAAA
ACTTACCAGG ATTTAGCTAT AGTTGACCGT ACCGGCGATG ACGGTTTAGC CAGCAAGGTG
TTTGACAACG CCGACTTTGG GTATTATAAA GTGACCATCG AACGGCCCAA ACGCCTGAAA
GCACAGTTCA GCGCCGAACG TATTGCCGAA CTTCGGTTCG ATAATAAACT GCGCGAGCCG
ATGGTGTGGG CCTGGGAAAC CTACGGCGAG CGGGTGTATA CCGACCTGCC CGCCCTGGAA
AAAGACATCA TCGACTGGTG CGAAAAACAG GAGCTGAATC TGGCCCGCAA GCAACAGGAA
GCCCTGCTCA AGCCCGACAA CTGGCTGAAG CAACAGGGCC TGATGAACAC CGCTACCAAA
CTGATGAAGG CCATTGGTAC GGACGAGTAC AGCAATTTCA ACATCTTTGC CCGCGAGGTA
GAAATGGAGT TGAAAGCGCT GGGGCTGAAG CTATCGGCCT CGGAAAAGAA GCAGATCATG
GATGCCGTAA GCTGGTACGA CGCCGAGGCC GAAAAGGTGA TCAAAGGCAC GACCAAACTG
AAAGGCGAAA AGCTGACCGA CCTGTTGGAG CACCTGAATT GCACCGAAGC CCAGCTACCT
GACTTCGGTT ATTTCGTTAC CGGAACGCCG GACCGCGAAA AGCCGGGTGA ATACCTCGAA
TACGAAACCG AATCGGACCT GCGCGATACG GAGAATGTAC CCCTTAAGGA AGACATCCAC
GACTATTTTC TGCGCGAAGT GAAGCCCCAC GTTTCCGAAG CCTGGATTAA CCTCGATGCT
ACTAAAATTG GTTACGAAAT CAGCTTTAAC AAGTACTTCT ACCGCCATAA ACCCCTGCGC
GATATAGCGG CTGTCAGTGC CGATATCCTG CAACTGGAAG ATGAAAGCGA AGGCCTGATT
AAAGCCATTC TGGCGTGGAG TTGA
 
Protein sequence
MNHQSHNKLV SFIWSIADDC LRDVYVRGKY RDVILPMVVL RRLDALLEPG KDEVMEEVRF 
QREEAGFTEL DVNGLQAASG YVFYNTSVWT LQKLHDTATN NQQLLEANFT DYLDGFSDNV
KEIIRKFNLK SQVKHMANKD VLLDVLEKFT SPTINLTPFE KLDPEGRKLP ALSNLGMGYV
FEELIRKFNE ENNEEAGEHF TPREVIDLMT HVIFEPIKDR LPPVMTIYDP ACGSGGMLTE
SQNFIKDEDG LIRAKGDVYL FGKEINDETY AICKSDMMIK GNDPENIKNG STLSTDEFAG
KQFDFMLSNP PYGKSWASEQ RHIKDGNEVI DSRFRIKLKN YWGVEEDADA IPRSSDGQLL
FLMEMVSKIK PLAASPSGSR IASVHNGSSL FTGDAGGGES NIRRYLIEND LLDAIIQLPN
NLFYNTGITT YIWVLTNSKP ANRQGKVQLI DAGPLYRKLR KNLGAKNCEL APEHITEIVK
TYQDLAIVDR TGDDGLASKV FDNADFGYYK VTIERPKRLK AQFSAERIAE LRFDNKLREP
MVWAWETYGE RVYTDLPALE KDIIDWCEKQ ELNLARKQQE ALLKPDNWLK QQGLMNTATK
LMKAIGTDEY SNFNIFAREV EMELKALGLK LSASEKKQIM DAVSWYDAEA EKVIKGTTKL
KGEKLTDLLE HLNCTEAQLP DFGYFVTGTP DREKPGEYLE YETESDLRDT ENVPLKEDIH
DYFLREVKPH VSEAWINLDA TKIGYEISFN KYFYRHKPLR DIAAVSADIL QLEDESEGLI
KAILAWS