Gene Slin_6235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6235 
Symbol 
ID8730018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7561797 
End bp7562252 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content47% 
IMG OID 
ProductProtein of unknown function DUF2383 
Protein accessionYP_003390993 
Protein GI284041063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.888626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACGA ATAAAGAAAT TGTTGACGAT CTCAATGAGT TGGTCAAAAT CAATAATGAC 
CGCATTCAGG GGTACGAAAA AGCGATTGAA GATACTCAGG ACCCACAGTT AGACGACCTC
TTCCGTCACT ACGTTGTCCA GAGCCAGAAT TTCCGCAGCC AGCTAGCCGA ACATATCGTT
CGTATCGACG GACTGGCAGT ATCTGATGCC ACCTCTACAG ACATATCGAG CAAAATTCAC
CGTGCCTGGA TCGACATAAA AGCCGCCATC ACGGGAAAAG ATAAAGAAAC GGTGTTGAGT
TCGGTAGAGT TTGGCGAGAA CGCGGCTGTC GAATCGTATA AAGATGCCAT TGAGAAAGAC
CATATCCCGG CTTATATCAA GGAAGATCTG CAAAAGCAGC TTACCCAACT GGAAGAAGCC
CTGGCCAAAG TGCAGGGTCT GAAGCAAGCC GCTTAA
 
Protein sequence
MITNKEIVDD LNELVKINND RIQGYEKAIE DTQDPQLDDL FRHYVVQSQN FRSQLAEHIV 
RIDGLAVSDA TSTDISSKIH RAWIDIKAAI TGKDKETVLS SVEFGENAAV ESYKDAIEKD
HIPAYIKEDL QKQLTQLEEA LAKVQGLKQA A