Gene Slin_6224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6224 
Symbol 
ID8730007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7545731 
End bp7546180 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content47% 
IMG OID 
Productprotein of unknown function DUF1348 
Protein accessionYP_003390982 
Protein GI284041052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.524129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGATG ACGTATTAGC TGAAAAAGAC GCACAAGTCG CTAAACGGTT ACCTTTACCG 
CCCTTTACGC TGGAAACGGC TCTGCAAAAA GTACAACTCG CAGAAGATGC CTGGAATAGT
AAAGACCCCG AAAAAGTAAG TCTGGCTTAT ACTATTGATA CAGAATGGCG CAATAGAACC
GATTTTATCA ACGGTCGTGA GGAGGTGAAG GCCTTTCTGA CCCGTAAATG GACCACCGAA
CTGGATTATC GACTAAAGAA AGAACTTTGG GGCTTTCGGG AAAACCGGAT GGCTGTTCGG
TTCGAATACG AGTGGCATGA TGCCGATGGG CAATGGTATC GCAGCTACGG TAATGAACTC
TGGGAATTTG ATGGAAACGG GCTCATGAAA AAACGGTTTG CCAGCATAAA CGACGCGCCC
ATTCTGGAAA CCGAACGACG TATTCGCTAA
 
Protein sequence
MWDDVLAEKD AQVAKRLPLP PFTLETALQK VQLAEDAWNS KDPEKVSLAY TIDTEWRNRT 
DFINGREEVK AFLTRKWTTE LDYRLKKELW GFRENRMAVR FEYEWHDADG QWYRSYGNEL
WEFDGNGLMK KRFASINDAP ILETERRIR