Gene Slin_6143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6143 
Symbol 
ID8729924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7450274 
End bp7450618 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content52% 
IMG OID 
Productputative transcriptional regulator, ModE family 
Protein accessionYP_003390902 
Protein GI284040972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.144159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCC GCATTAACGG CCGCGTCTGG CTTGAAACAC TTTCTAATGA TACCACCGAA 
CGATTCATGG GCATCGGTCG GCTGGAATTA CTGGGTCATA TTCAGCGTAC CGGCTCCATC
AACCAGGCCG CTAAAGCCAT GAAAATGTCC TATAAACGGG CTTGGGAGAT GGTCCATTCC
ATGAATACCC AAGCCAACAC ACCGCTCGTT ATGACCCAAA CCGGGGGCGA AAAAGGCGGT
GGAACCCTTG TAACCCCTGA AGGCGAAAAA TACCTTAATC ACTACCGGGG CCTACAGGAA
CGATTCCAGA AGTTCCTGGC CGACGAACTG GCCAATTTGC CCTGA
 
Protein sequence
MNLRINGRVW LETLSNDTTE RFMGIGRLEL LGHIQRTGSI NQAAKAMKMS YKRAWEMVHS 
MNTQANTPLV MTQTGGEKGG GTLVTPEGEK YLNHYRGLQE RFQKFLADEL ANLP