Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6061 |
Symbol | |
ID | 8729842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7358064 |
End bp | 7359494 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Curli production assembly/transport component CsgG |
Protein accession | YP_003390822 |
Protein GI | 284040892 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAC TTTTTTTCAA AGCTATCCAG CTCCTTATGC TGACTGGCTT GGTGGGCATT TTGTCGGGGT GTACCGCTTT TTTCTTTCAA CCCACAAAAG CCCGGCGGGC TCGGTTAGGG GAAGAAACAC CCGTTACGGC AGACTTACAC CGACTGCCGG TTGCCAAAGA AAAAATCATC ACTGCCGTTT ACAAGTTCCG GGACTTAACC GGTCAGTACA AGCAGATTGA AGCGGGTTCG ACCTTCTCCA CCGCTGTTAC CCAGGGAACC ACCAACATAC TGCTTAAAGC GCTCGAAGAG AGTGGCTGGT TTTTACCCAT CGAACGCGAG AATGTCAGCA ATCTGCTCAA TGAGCGGAAA ATTGTACGCT CCAGTGTAGC CCAGTATAAA GAAGGCGAAA ATCTACCTCC TTTGCTGTTT GCCGGTATTA TTCTGGAAGG GGGCGTTGTT TCGTACGATG CCAATATCAT CACCGGTGGT GGCGGACTTC AGTACTTCAG CGCCGGTGGC TCAACACAGT ACCGGCAGGA CCGGGTAACG GTTTACCTGC GGGCTGTATC CACAAAGTCG GGGAAAATTC TCAAAACGAT TTATACCTCC AAAACCATTC TGTCGCAAAC GGTCAACGCC AGCCTGTTTC GGTATGTGAC CTTCAAACGG CTGCTGGAAA CCGAAACGGG CCTGACCACG ACCGAACCGG GTCAGCTGGC CGTTACGGAA GCCATCGAAA AGGCCGTTCA GGGGCTCATT ATCGAGGGTG TGCGGGATGG ATTGTGGCTC CCGGCCGATA ATCAGGTTGC CGCCATGCAG GCGGTTGTCA AGGACTACGA GAAAGAGAAA ACCGTAATGA GCGAAACGGA TGTGTACGGC ATACGTCCCG AAGTAGCCCC GCCTTTTCTA AGCGTACACA CCTATGCCGG TGCGATGCGA TATTATGGCG ACTACGCTCG CCGTACCATC AAAGGAAGCT ACGGGGCTTC TGTCGATTTC CACATTACGC CCGCCTTTGG CTTGCAGGTG AACGGTGCTA CCGGCGTTCT GGCCAGCGAA GGGGCTTTTT CGACGAACAT CACCTCCCTG GAAGGTAATC TGATTCTTCG TTTAACGCCC TATCAGCGCT GGACATCCCT CTTATTTGCA GGTGCCGGTG CTGTTTCGCA GAGTGGCTCA TCACCCTTCC AATGGCGGGG AGCCAGTTAC TTACAGGCTC AGGGAGGAGT TGGCGTGCAG TTTTCGCCAA GTAAGGTAAT CGGATTCCGC TCTACTTTAT CTTATAACCA GCCTTTTACG GATGCGCTGG ACAGTAAAGT GGCCGGAACC CGTAATGACT ACTACCTACG GGGAACGCTG GGGGTGGTTT TCCATATCGG CCGCTTCTCG CCACCAAAAG TAAAGCCACT CACTCCGCAG CAGCCGGTAA TGAACAAATA A
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Protein sequence | MKVLFFKAIQ LLMLTGLVGI LSGCTAFFFQ PTKARRARLG EETPVTADLH RLPVAKEKII TAVYKFRDLT GQYKQIEAGS TFSTAVTQGT TNILLKALEE SGWFLPIERE NVSNLLNERK IVRSSVAQYK EGENLPPLLF AGIILEGGVV SYDANIITGG GGLQYFSAGG STQYRQDRVT VYLRAVSTKS GKILKTIYTS KTILSQTVNA SLFRYVTFKR LLETETGLTT TEPGQLAVTE AIEKAVQGLI IEGVRDGLWL PADNQVAAMQ AVVKDYEKEK TVMSETDVYG IRPEVAPPFL SVHTYAGAMR YYGDYARRTI KGSYGASVDF HITPAFGLQV NGATGVLASE GAFSTNITSL EGNLILRLTP YQRWTSLLFA GAGAVSQSGS SPFQWRGASY LQAQGGVGVQ FSPSKVIGFR STLSYNQPFT DALDSKVAGT RNDYYLRGTL GVVFHIGRFS PPKVKPLTPQ QPVMNK
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