Gene Slin_6035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6035 
Symbol 
ID8729816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7319433 
End bp7320833 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content53% 
IMG OID 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_003390796 
Protein GI284040866 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACG ATGTTATTGT GATTGGTTCG GGGCCGGGGG GCTATACAGG TGCAATCCGT 
TGCGCTCAAC TCGGACTGAA AACGGCCATT ATCGAGAAAT ACCCATCCCT GGGCGGCACC
TGCCTGAACG TAGGCTGCAT TCCATCCAAG GCCCTGCTCG ACTCGTCGGA GCATTATTAC
AATGCTGCGC ACACCTTTGC CGAACACGGT ATTAAACTGG CCGACCTGCA AGTCGACCTG
GCGCAGATGA TTACCCGCAA AGCCAGCGTG GTTGAGCAAA CGACGAAGGG GATTGCCTTT
CTGATGAAGA AAAACAAAAT CGACGAGTTG CACGGCGTCG GTTCGTTTGT GGACCCGCAT
ACCATCAAAA TCACCAAAGA CGATGGGTCG GAGCAAATTA TCAAAGGAAA GAATATCGTG
ATTGCCACGG GATCGAAACC GATGTCGTTT CCATCCATGC CGATTGATAA AAAACGCGTA
ATCACCTCAA CGGAAGCGCT CACGCTTCAG GAGATACCCA AACACATGAT CGTGATTGGG
GCGGGCGTTA TCGGGGCTGA ATTGGGCTCG GTGTACGCTC GTATTGGCTC GAAAGTGTCG
TTTGTGGAGT TCGCCGATTC GATGATCCCA ACGATGGATA AAACGATGGG TAAAGAGCTT
CAGAAGTCCA TCAAAAAATT GGGTGCCGAT TTCTACTTCA GCCATAAAGT TACCAAAGTC
GAAAATACCG GCGAGGAAGT TATCGTGAAC GTCGACACGC CGAAAGGCGA GCAGATCACC
CTCACCGGCG ACTATTGCCT GGTTTCGGTG GGTCGTCGTC CTTATACTGA CGGCTTAAAT
CTGGAAGCGG CCGGTCTGAA AACCGATGAT CGGGGTAAAC TCGAAGTAGA TAACCACCTC
CGCACCAGTG TTCCGCATAT TTACGCCCTT GGTGACGTAA TTCGGGGTGC CATGCTGGCC
CATAAAGCCG AAGAAGAAGG TACGTTCATT GCCGAAACCA TTGTCGGTCA AAAGCCGCAC
ATTCACTATC GGCTCATTCC GGGCGTGGTG TATACCTGGC CGGAAGTAGC CTCGGTAGGC
TATACCGAAG AAGAGGTGAA AAAAGAAGGG ATTCCTTATA AAGTGGGTTC GTTTCCGTTC
AAAGCGCTGG GCCGCGCCCG GGCGAGTATG GACGTTGATG GGCTGGTAAA AGTGCTGGCA
CACAAGGAAA CCGACGAGAT TCTGGGTGTT CACATGATTG GTGCCCGTGC GGCCGACATG
ATCGCCGAAG CCGTTGTTGC CATGGAGTTC CGGGCATCGG CCGAAGATGT GTCGCGCATG
TCGCACGCTC ACCCGACCTA TACCGAAGCG TTCAAAGAAG CCTGTCTGGC CGCTACAGAC
AACCGGGCGA TCAACATGTA A
 
Protein sequence
MEYDVIVIGS GPGGYTGAIR CAQLGLKTAI IEKYPSLGGT CLNVGCIPSK ALLDSSEHYY 
NAAHTFAEHG IKLADLQVDL AQMITRKASV VEQTTKGIAF LMKKNKIDEL HGVGSFVDPH
TIKITKDDGS EQIIKGKNIV IATGSKPMSF PSMPIDKKRV ITSTEALTLQ EIPKHMIVIG
AGVIGAELGS VYARIGSKVS FVEFADSMIP TMDKTMGKEL QKSIKKLGAD FYFSHKVTKV
ENTGEEVIVN VDTPKGEQIT LTGDYCLVSV GRRPYTDGLN LEAAGLKTDD RGKLEVDNHL
RTSVPHIYAL GDVIRGAMLA HKAEEEGTFI AETIVGQKPH IHYRLIPGVV YTWPEVASVG
YTEEEVKKEG IPYKVGSFPF KALGRARASM DVDGLVKVLA HKETDEILGV HMIGARAADM
IAEAVVAMEF RASAEDVSRM SHAHPTYTEA FKEACLAATD NRAINM