Gene Slin_5949 details

Gene Information

• Locus tag: Slin_5949
• ID: 8729730
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: +
• Start bp: 7209300
• End bp: 7212758
• Gene Length: 3459 bp
• Protein Length: 1152 aa
• Translation table: 11
• GC content: 51%
• Product: hypothetical protein
• Protein accession: YP_003390710
• Protein GI: 284040780

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 41
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAACAGG CGGAATGTAT CAGCAGACTT GCAGGATGGT CAAAGCAACG TGCTTGGGCA 
AAACTGATCG TAATCTTCTG TTTCCATTGG TTCGTGTTCA ATAGTCAGTC ACCTGCGCTG 
GCGCAATCTG TTTTGAAAAC GGGTGTGTGG GTGAAAATAG GTGTAACTCA GTCGGGGGTA 
TATCGACTCA GTCAGGGACA ACTGGCGCAG CTCAATCCTG CCTTTAGTAC TGCCGATCCC 
CGCCGTTTGC GGCTATATGG AAATGGTGGC GCCATGTTGC CCCAGAGCAA TGCCAGTCCG 
CGCCCCGCCG ATTTAACCGA AAATGCCATT CAGGTACAGG GTGAAGCGGA TGGACGATTT 
GATGCGTCTG ACGTGCTCCT GTTTTTTGGG CAAAGTCCGC ACGTTGTTCG ATATGATTCA 
ACGAACCGCC GGTTTACGCA TCAGCTCAAT GCCTATTCTG ATACAACCTT CTATTTCCTG 
ACCATCGGTG ATGCGCCTGG TCTGCGCATG ACGGAGCGGC CGTCGGGTAG CCTGTCGGCT 
ACGCCCACTG TTACGACGTT TGACGATTAC CAGTTTTACG AACAGGACTT ATTGAAAGTA 
CCCGCTGTGC GGTCGGGCCG AGAGTGGCTG GCCGACTACC TCACCATCGA TACTACAAAG 
ACAGTGTCGT TCGACGTTAC CGGGCTTGTT GCCAATACCT CGATTCGGCT GGCCGCTTCT 
GCCGTGGCCG GAGCACCATT GTCAACGCAG TTCAGACTCC AGCTTAATGA TCAGTTAGTT 
GGAACGATGC CCATGTCCAC AATTTCGGGT TATGAGTACG ACTATCAGGG CGTTGCTAGG 
ACGGATACAT TTCTGACGAG GCTGACAGCC GCCGTTAGTT CGATTCGTCT GGCACTGACT 
TTTCGGAAAA ACGGGCAGTA TTCAGCCCAG GGGTATCTTA ACTTTCTGGC TCTTCAGACC 
CGGCGCGAAC TTCGGCAGTA CGACAAGCCG ATGTGGGTTC GTCGGCTGAT GCCGGGGCAA 
TATGCGGTTC GGCAGGCAAC AAGCAGCCTG CGTATTTGGG ATGTCACAAA CCCGCTGACC 
CCTATCATCC AGGGGTATGT TTTATCGGCA GCACAGGAAG CTGGCTGGCT GGGAATAAAA 
GCCAGCGATT ACTTTCTTTT CAGCGATGCC CAAATCCTGT CGCCTGCATC GCTGAACACG 
ATTGCCAACC AAAATGTACG GGCTCAACTA GTACCCGATC TGCTGATTGT AACCCCGGCG 
GCCTGGCGTG ATCAGGCCGA CCGATTGGCT CAGTTCCGAC GCGACCACGA CCAACTCTCA 
GTGCTGGTTG TGACCACTCA GCAGGCTCTT AATGAATTCG GTTCCGGCCA GCCCGACCCA 
ACGGCGATTC GGGATATGGT GCGGTATTTT TATCAGCAGC AGCCAACTAA ACTTCGCTAT 
GTATTGCTTT TCGGCGATGC AACGTTCAAT TACCGGAATA TTGGTGGCTT GGTAAGCCCG 
GCCCAACTGG CTAACATGGT ACCCGTTTAC GAGAGTCGAG AGTCACTGCA CCCGGTATTA 
AGCTATTCGT CCGACGATTA TTTCGGATTC ATGGATAGTC ACGAAGGGGA GTGGCCCGAA 
AACCAGAATG GCGACTATAG CCTTGATGTT GGTATTGGCC GGATACCGGC AAAATCGGTG 
GAGGAGGCCC GGACGGTTGT TGATAAACTC ATTCGATACA GTTCCGATCC GTCACTTACG 
GGTGACTGGC AAACCCGTCT GATGCTGATT GCCGACGACG GCGATTACAA TATCCACCAG 
CAGGATGCCG ATCAAATGGC GCGTAGCGTT GAGAAAACAG CACCTGCCTA CCGCCCCCAG 
CGGGTATTTC TGGATGATTA TCCGCAGGAA AATACCAGTA CTGGGCAGAA AGTGCCCATA 
GTCAATAAGC TGATCAACCA GGGTATTGCA GATGGACAGC TCATTATCAA TTACAGTGGT 
CACGGGGGTA TTCTGGGCCT TGCCGATGAA CAGATTGTGA CACTTCAGGA CATACTTTCC 
TGGAAAAACA AACGCTTGCC GCTATTCGTG ACAGCCACTT GCCAGTTTGG ACGTTATGAC 
GACCCAAGTG TTAGCTCCGG TGCTGAGTTA ACCCTTTTAA GCCGGACAGG GGGCGCTATC 
GGGTTGCTGA CAACTACCCG GCCCGTGTAT GCCAATACAA ATCTGCTGCT GAATCAGGCA 
TTCTATGATG CTGTTTTTAC GCCGATCAAT GGTCAGATGC CCCGTTTGGG CGATGTCATG 
CGGAGTACCA AGAACAACAG TTTAAGTGGA CCTGTCAACA GAAACTTCGC ACTACTGGGC 
GATCCATCCC TGAGATTAGC CTATCCAACG GCCCAGGCTG TACTGACGCA GGTAAACGGT 
AAGGCAGTAA CTGTTAATCG GGCAGATACC TTAAGGGCCT TACAGACAGT GCAACTGTCG 
GGCGAAATCC GTCAGCAGGG TCAACGGCTA GCTAATTTTT CGGGATTGCT GCGGCTGGCT 
TTATATGACA AAGCTGTTAA ACGAACTACA CTGGGTTCTG AAGCCGGTAG TCCCAGAATG 
ACGTATCAGG TATTTGCCAA TCCAATTTTC ACCGGGCAGG TACCGGTTCA ACAGGGACAG 
TTTGCCGTTA GATTTACCAT GCCCAAAGAT ATTGACTATA CGGTCGGACC AGGGAAACTC 
TATTTATACG CTATACCGGC TGATAGCACA CGTAGTGCAT TGGGGAACTA CGATAATTTA 
CTAATAGGAG GCAGCGTTCT CACGGATAGT GTTGATAATC AGTCCCCCAC TGTAGCGCTC 
TCGGTGGTTG GCGCAGCAAC GGAAGGTGAA AAGGTACGGG TGGCTGGCCC GGACGTAACC 
TTACGGATTA GACTGGCCGA CAATAAAGGC ATCAACATTA CCCGAACGGG TCTGGGGCAC 
GAACTAACTG CCCGGCTTAA TGACCAGCCA GCGGTTATTT TAAACGAAAG CTACATTGCA 
AATGGTGCAG ATGGTCGGCA GGGCGACGTT TATTATACCT TTCGTGATGT TACTCCCGGA 
ACGTACACAA TTCGAGTCAA AGCCTGGGAC ATTAACAATA ATTCAACGGA GGGCACGTTG 
ACCTTATTAG TTTCGGAACG ACCAGGGCTG GAAGTACGCT CGCTGCGGGC AAATCCAAAT 
CCTGTTAGTG TCCAGACAAC ATTTGTAGCC GAGTTAAACC GATCAGGTGA GCCGCTGGAC 
TGGACATCGA CTGTGTATGA TCTGAACGGA CGATTACTCA ATCAACAGTC AGGGCAATGT 
ACTGATTGTG CTGCTGTACT GGACGCTGGC GTCTGGAATG GTACCAGCCA CACAGGGCAA 
ACACTACCAA ATGGTATGTA TTTTGTTCAG TTTCAGGTTC GTTCGGCCGC TGATGGGTCA 
GAGGCTAGAA AAACATACCG TATACTATTA ACTAAATGA 

 

Protein sequence

MKQAECISRL AGWSKQRAWA KLIVIFCFHW FVFNSQSPAL AQSVLKTGVW VKIGVTQSGV 
YRLSQGQLAQ LNPAFSTADP RRLRLYGNGG AMLPQSNASP RPADLTENAI QVQGEADGRF 
DASDVLLFFG QSPHVVRYDS TNRRFTHQLN AYSDTTFYFL TIGDAPGLRM TERPSGSLSA 
TPTVTTFDDY QFYEQDLLKV PAVRSGREWL ADYLTIDTTK TVSFDVTGLV ANTSIRLAAS 
AVAGAPLSTQ FRLQLNDQLV GTMPMSTISG YEYDYQGVAR TDTFLTRLTA AVSSIRLALT 
FRKNGQYSAQ GYLNFLALQT RRELRQYDKP MWVRRLMPGQ YAVRQATSSL RIWDVTNPLT 
PIIQGYVLSA AQEAGWLGIK ASDYFLFSDA QILSPASLNT IANQNVRAQL VPDLLIVTPA 
AWRDQADRLA QFRRDHDQLS VLVVTTQQAL NEFGSGQPDP TAIRDMVRYF YQQQPTKLRY 
VLLFGDATFN YRNIGGLVSP AQLANMVPVY ESRESLHPVL SYSSDDYFGF MDSHEGEWPE 
NQNGDYSLDV GIGRIPAKSV EEARTVVDKL IRYSSDPSLT GDWQTRLMLI ADDGDYNIHQ 
QDADQMARSV EKTAPAYRPQ RVFLDDYPQE NTSTGQKVPI VNKLINQGIA DGQLIINYSG 
HGGILGLADE QIVTLQDILS WKNKRLPLFV TATCQFGRYD DPSVSSGAEL TLLSRTGGAI 
GLLTTTRPVY ANTNLLLNQA FYDAVFTPIN GQMPRLGDVM RSTKNNSLSG PVNRNFALLG 
DPSLRLAYPT AQAVLTQVNG KAVTVNRADT LRALQTVQLS GEIRQQGQRL ANFSGLLRLA 
LYDKAVKRTT LGSEAGSPRM TYQVFANPIF TGQVPVQQGQ FAVRFTMPKD IDYTVGPGKL 
YLYAIPADST RSALGNYDNL LIGGSVLTDS VDNQSPTVAL SVVGAATEGE KVRVAGPDVT 
LRIRLADNKG INITRTGLGH ELTARLNDQP AVILNESYIA NGADGRQGDV YYTFRDVTPG 
TYTIRVKAWD INNNSTEGTL TLLVSERPGL EVRSLRANPN PVSVQTTFVA ELNRSGEPLD 
WTSTVYDLNG RLLNQQSGQC TDCAAVLDAG VWNGTSHTGQ TLPNGMYFVQ FQVRSAADGS 
EARKTYRILL TK