| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5935 |
|---|
| Symbol | |
|---|
| ID | 8729716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 7193715 |
|---|
| End bp | 7195217 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | glycerol kinase |
|---|
| Protein accession | YP_003390696 |
|---|
| Protein GI | 284040766 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCTT ACATCGCCGC CATTGACCAG GGAACGACCA GTACCCGTTG TATTGTATTC
GACCGACAGG GCAAGATCGT TTCCGTTGCT CAGAAGGAAC ACAAACAGAT TTACCCGCAA
CCCGGCTGGG TAGAGCACGA CCCCGAAGAA ATCTGGCGCA ATACACTCGA AGTAATTGCC
CTGGCTCGTA TCAAAGGCAA ACTTTCTGTT CAGGATATCA AGGCCGTAGG CATTACCAAC
CAGCGCGAAA CCACCGTTGT CTGGAACCGC CGGACGGGTA AGCCGTACTA CAACGCCATT
GTTTGGCAGG ACATGCGTAC CGCCGATCTG GTTCTTGAGT TCTCGGCCAA TGGGCTTGGA
CAGGATCGGT TTCGCGAGAA AACAGGGCTT CCGCTGGCTA CCTACTTTAG CGGTTTGAAA
CTCAAATGGC TGCTGGATCA TGTACCGGGG CTTCGAGAAG ATGCCGAACG GGGCGACGCG
GTTTTCGGCA ACATGGACAC TTTTGTGGTC TGGAACCTGA CCGGTGGTGT AAACGGTGGT
CTGCACCTGA CCGATGTTAC CAACGCCAGC CGGACGCAGC TCATGAATCT GCACACCCTT
AACTGGGACG ACAGCTTATT AAGCGACTTC ACGGTGCCCC GCGCCATGCT GCCCCAGATA
CGCCCCAGCA GTGAGGTGTA CGGAACGGTA TCGTCGGAAG TGTTACCGGG CGTTCCGGTA
GCGGGTATTC TCGGCGATCA GCAGGCCGCC CTCGTTGGCC AAACCTGCTA CGAACCGGGT
CAGGCGAAAA ACACCTACGG AACGGGCTGT TTCCTACTGA TGAATACCGG CACCGAACTC
CGAAAATCGA CCTGCGGACT GTTAACAACG GTAGCGTATC AGTTTCAAAA TGAGCCGGTT
CATTACGCGC TCGAAGGCAG CGTGGCAATT ACCGGTGCGC TGGTGCAATG GCTGCGCGAC
AATCTGGGTA TCATTAAAAA GAGCACCGAC ATTGAAACCC TGGCCCGCAC GGTTGAGGAT
AATGGGGGCG CTTATTTTGT ACCTGCTTTC TCGGGCCTCT ATGCTCCCCA CTGGAAAGCC
GATGCGCGGG GCGTTATTGC CGGCCTAACG CGTTTTGTCA ACAAAGGTCA TATTGCACGG
GCTGTTCTGG AAGCTACCGC TTATCAGACC GTCGATGTTG TCCGGGCGAT GGAGCAGGAT
GCGGGTGTAT CGCTCAAATC TCTGCGCGTG GACGGCGGCA TGGTTGTTAA CTCTCTGCTC
ATGCAGTTTC AATCCGATGT ACTAAATGGG CCCGTTATCT GCCCCCGCAT GACAGAAACG
ACGGCTCTCG GAGCTGCTTA TGCTGCCGGG TTAGCCGTTG GTTACTGGCA AAATCTGGAT
GACCTCCGCC AGAACTGGGG CATTGCCAAA ACCTACGAAC CTAATATGGA CGATGCACAG
CGCACAAAGC TAATGCGCGG GTGGCAGAAG GCCATCGAGC GGTCGTTTGG GTGGGAAGAA
TGA
|
|---|
| Protein sequence | MPSYIAAIDQ GTTSTRCIVF DRQGKIVSVA QKEHKQIYPQ PGWVEHDPEE IWRNTLEVIA
LARIKGKLSV QDIKAVGITN QRETTVVWNR RTGKPYYNAI VWQDMRTADL VLEFSANGLG
QDRFREKTGL PLATYFSGLK LKWLLDHVPG LREDAERGDA VFGNMDTFVV WNLTGGVNGG
LHLTDVTNAS RTQLMNLHTL NWDDSLLSDF TVPRAMLPQI RPSSEVYGTV SSEVLPGVPV
AGILGDQQAA LVGQTCYEPG QAKNTYGTGC FLLMNTGTEL RKSTCGLLTT VAYQFQNEPV
HYALEGSVAI TGALVQWLRD NLGIIKKSTD IETLARTVED NGGAYFVPAF SGLYAPHWKA
DARGVIAGLT RFVNKGHIAR AVLEATAYQT VDVVRAMEQD AGVSLKSLRV DGGMVVNSLL
MQFQSDVLNG PVICPRMTET TALGAAYAAG LAVGYWQNLD DLRQNWGIAK TYEPNMDDAQ
RTKLMRGWQK AIERSFGWEE
|
|---|
| |