Gene Slin_5926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5926 
Symbol 
ID8729707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7181620 
End bp7182456 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content45% 
IMG OID 
ProductRod shape-determining protein MreC 
Protein accessionYP_003390687 
Protein GI284040757 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAGT TAGTCGATTT TTTCGTCCGT AGCCGAAACT TTATTTTATT CGTATTGCTG 
GAAGTACTTT GTTTCTACTT CATTATCAAT ACCAGCAATT ATTGGAGTGT CACGTATTTC
AATACGTCGA ATCGGTATGC GGCTCAGGTA CTGGCCTGGT CGAACGCGGC CAATGAATAC
ACGAGTCTTC GTCAGGTTAA TGCCGATCTA GCCCTGGAAA ACCAGCGGCT CAACGCTCAG
CTAACGAAGC TCCTTCAAAG TAAGCCAGTG GCTCCGGCAG AATATATGGC CGACTCGGCA
TTTGCTGACC GATTTAAGTT TACGGCCGCT AAAGTTGTCG ATAACACTAC ACAGTTTGCC
AACAATTACA TTACCATCGA TAAAGGCACT GACGATGGTA TCCGGCCGGG TATGGGTGTT
ATCTCGCCAA CGGGTGTAGT AGGTAAGGTG AAAGTATGTA ATCGACATTT TTCGGTGATC
ACCTCTATTC TTCATTCCGA GTTTCTAGTA TCATCACAGC TTGTAAAAGC TAAAGATATT
GGCTCTGCCA AATGGGATGG CGGTGACCCG CACTTGATAA AACTGAACGA TATTTCGCGC
TACAAGCCTG TCAGCAAAGG AGACTCCGTT GTGACCTCGG AATACAATTC AACCTTCCCT
CCCGGAATTT TAGTCGGCCG TGTCTATTCG GTTGGTGTCC AGCCCAATAT GACGTTTCAT
GACATCACGC TTAATCTGGC GACGAATTTC AGTACCTTAT CGTATGTATA TGTTGTCGAA
AATCGCCTTC AGGGCGAACA GGAACAGTTA GAAAAACAAA TTGAAAACGA AAAATAG
 
Protein sequence
MGELVDFFVR SRNFILFVLL EVLCFYFIIN TSNYWSVTYF NTSNRYAAQV LAWSNAANEY 
TSLRQVNADL ALENQRLNAQ LTKLLQSKPV APAEYMADSA FADRFKFTAA KVVDNTTQFA
NNYITIDKGT DDGIRPGMGV ISPTGVVGKV KVCNRHFSVI TSILHSEFLV SSQLVKAKDI
GSAKWDGGDP HLIKLNDISR YKPVSKGDSV VTSEYNSTFP PGILVGRVYS VGVQPNMTFH
DITLNLATNF STLSYVYVVE NRLQGEQEQL EKQIENEK