Gene Slin_5855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5855 
Symbol 
ID8729630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7095057 
End bp7097627 
Gene Length2571 bp 
Protein Length856 aa 
Translation table11 
GC content54% 
IMG OID 
Productcell divisionFtsK/SpoIIIE 
Protein accessionYP_003390619 
Protein GI284040689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAC CAACAACATC GCCCCGCCAG AATACACTCC GACGACCTGC TGAACCGCGT 
CCGCGCGCAA ATCGCGATGG CAATCCGTCG CCGGCCCGTT CGCAAAGTAC GTCGTTCAAC
TGGGGGGCGG CACTTGACCG ATGGCTTACC GACCAGCGTT CGACCTTAAC ACTGGGGGTG
TTATTGATGG GTCTGGCGCT CGGTTTGATG GTAGCATTCA TGTCCTACCT GCTAAACGGC
CCTGCCGACC AGAGTGTGGT GGGAGCCGCA TTTTCCGAAC CGCTGAACGA ATCTGGCAGC
GAAACCCGTA ACTGGGTCGG TCTGGTGGGG GCGTATGTAG CGCATGTTTT CGTCTTCCGT
TGGTTCGGAG TGGGGGCGCT GGCTATACCG ATCATCGTTT TTCTGGCGGG TTACAAAATG
ACCTTCGGGA GTGAACTGCT GCCCCTGAGC CGGACAACAA CGGGCCTGTT GTTTGCCTCC
GTCTGGATCA GCCTCATACT GGGCTACATC GTACTCGTTA CCGATTCTGC CGAAACGGCC
AGCGTCTGGT GCGGTGGTAT TGGGTACGAG TTCAACGTGG CGTTGTATAG CCTTTTTGGG
TGGGGCAATC TGGCCTTTAT TGCCTTTGCA CTTTTTGCCT TTGTTATTTA CTTCTTCGAT
GTAAGATCGA TCAAGCTGCC AACCTTCTCC CGCCCATCGT CACCCAAGCC CAACCGGCGG
TCGTCCGATC CTCTGCAAAC GTATTCAGAG AGTGAAGAGG AACCCAACGA AGAAGACGAG
CAGGATGTTG ACGATGCACG GGAAACCGCA CCCGAATCCA TTCAGCCTCC ACTGGCAAAC
ACCTTTGCCA ATACGCCGGT AGCGCCACCA GCCAGAGAGC AGGAAACGCC TTTGCCGGAG
GTCATTGCTC AAACAACGGG GGTTACACTT ACGATCAAAA ACCGCGAAGC CGTAGCCGAT
ACTCCCGATT CGTCGGAGGA GTTGAGTGCG ACCCCCGCTC CTACCTTTGA GCCGGACCCA
TTCGAAGAAG ACGATCTGGT TGCGCTTCAT GGCTTGTACG ACCCAACCAT TGACTTACCC
CAGTATCAAT ACCCGGTCAA TGAGTTGCTG ACAGACTATC CGAACAGCCG TAAAGCGCAG
GTCTCGGACG ATGAGCTGAC GGTCAACAAA GAGAAGATCG AGAATACGCT CCGCAACTTC
GGCATTGAAA TTGACTCTAT TCAGGCATCC ATCGGACCAA CGGTTACGCT GTACGAAATT
ATTCCGGCCA AAGGTGTGCG CATTTCCAAG ATCAAAAGCC TGGAAGATGA CATCGCACTG
AGCCTCTCGG CACTGGGCAT CCGGATTATT GCCCCCATGC CCGGTATGGG AACGATTGGT
ATTGAAGTAC CGAACAAGAA CCGGGAAATG GTTTCGATGC GGTCGGTTAT TACCAGCGAT
ATTTTCAGCA GCAGCAAGTT CGACCTGCCA ATCGTACTCG GAAAAACCAT TTCGAACGAA
ATCTACGTTG CCGACCTAGC CAAGATGCCG CACTTATTAA TGGCCGGGGC CACCGGACAG
GGTAAGTCGG TAGGGCTAAA CGTGCTGCTA ACGTCGCTCA TCTACAAGAA GCACCCTTCG
CAGCTTAAGC TGGTGCTAGT CGACCCGAAA AAAGTGGAGT TGACCCTGTT CAATAAGCTG
GAACGACACT TCCTGGCCAA ACTTCCTGAT TCGGAAGAGC CGATCATTAC CGACACCAAG
AAGGTTGTCA ATACGCTGAA TTCGTTGTGT ATCGAGATGG ATAACCGCTA CAACCTGCTC
AAAGATGCCG GTTGCCGGAA CCTCAAGGAA TACAATGCAA AGTTTATAAA GCGTCGACTC
AACCCCGAAA AAGGTCACCA CTTCCTGCCT TACATTGTCC TGATTATCGA CGAGCTGGCC
GACCTTATGA TGACGGCGGG CAAAGAGGTC GAGCAACCCA TTGCCCGGCT GGCGCAGCTG
GCGCGGGCTA TTGGTATCCA CCTGGTTGTC GCTACGCAGC GGCCATCTGT AAACGTTATT
ACCGGCCTTA TAAAAGCCAA CTTCCCGGCG CGTCTGTCGT TTAAGGTTAC GTCGAAAATC
GACTCCCGCA CCATTCTGGA TACGGGTGGT GCTGAGCAAC TGGTGGGTAT GGGTGATATG
CTGCTGTCCT CCAACTCCGA TATCATTCGG CTGCAATGTC CCTTTGTCGA CACCAACGAG
ATTGAAGATA TTTGTGAGTT CGTCGGCAAT CAGCGGGGCT ACGATGACGC GTATGCGCTA
CCGGAATTCG TTGGAGACGA GGGCGGTCAG GGAGACGATA AGGACGTAGA CATGACCAAC
CGCGACCCGA TGTTCGACGA AGCCGCCCGA CTTATCGTTA TTCATCAGCA GGGAAGCACC
TCACTCATTC AGCGTAAGCT CAAACTCGGT TACAACCGCG CCGGCCGTTT GGTCGACCAG
TTGGAAGCCG CCCGAATTGT GGGCCCGTTT GAGGGAAGCA AAGCCCGCGA TGTGCTGGTA
CAGGATTTAC AGACGCTGGA AGAGATACTA AAGCGACTGA AAGGTGAGTA A
 
Protein sequence
MAQPTTSPRQ NTLRRPAEPR PRANRDGNPS PARSQSTSFN WGAALDRWLT DQRSTLTLGV 
LLMGLALGLM VAFMSYLLNG PADQSVVGAA FSEPLNESGS ETRNWVGLVG AYVAHVFVFR
WFGVGALAIP IIVFLAGYKM TFGSELLPLS RTTTGLLFAS VWISLILGYI VLVTDSAETA
SVWCGGIGYE FNVALYSLFG WGNLAFIAFA LFAFVIYFFD VRSIKLPTFS RPSSPKPNRR
SSDPLQTYSE SEEEPNEEDE QDVDDARETA PESIQPPLAN TFANTPVAPP AREQETPLPE
VIAQTTGVTL TIKNREAVAD TPDSSEELSA TPAPTFEPDP FEEDDLVALH GLYDPTIDLP
QYQYPVNELL TDYPNSRKAQ VSDDELTVNK EKIENTLRNF GIEIDSIQAS IGPTVTLYEI
IPAKGVRISK IKSLEDDIAL SLSALGIRII APMPGMGTIG IEVPNKNREM VSMRSVITSD
IFSSSKFDLP IVLGKTISNE IYVADLAKMP HLLMAGATGQ GKSVGLNVLL TSLIYKKHPS
QLKLVLVDPK KVELTLFNKL ERHFLAKLPD SEEPIITDTK KVVNTLNSLC IEMDNRYNLL
KDAGCRNLKE YNAKFIKRRL NPEKGHHFLP YIVLIIDELA DLMMTAGKEV EQPIARLAQL
ARAIGIHLVV ATQRPSVNVI TGLIKANFPA RLSFKVTSKI DSRTILDTGG AEQLVGMGDM
LLSSNSDIIR LQCPFVDTNE IEDICEFVGN QRGYDDAYAL PEFVGDEGGQ GDDKDVDMTN
RDPMFDEAAR LIVIHQQGST SLIQRKLKLG YNRAGRLVDQ LEAARIVGPF EGSKARDVLV
QDLQTLEEIL KRLKGE