Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5846 |
Symbol | |
ID | 8729621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7085314 |
End bp | 7086102 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003390610 |
Protein GI | 284040680 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.704953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTTA CACTAACTGG AAAGACTGCC CTTGTTTGCG GTAGTACACA AGGCATTGGG CGTGCTGCGG CTGTTGAGCT GGCCCTTTTG GGAGCCAACA TTGTGCTGAT GGCCCGCAAC GAACAAACAC TCCGCGAAAC CCTGGCTGAG CTAGATGCCA GCCAGGGCCA AACGCACCGG TATCTGGTGG CAGATTTCAG CCAGCCGGGC GAAGCCCCGG CGGTACTCAG CCAGCACCTT GCACAGTTTC CGGACGTGCA CATCTTGATT AACAACACCG GCGGGCCTGC GGGGGGACCA TTGATTGCCG CCAAACCGGA TGAATTTACC CAGACATTCC ACAATCACCT GCTCAATAAC CAAGCGCTGG TTCAAGCGGT TTTCCCCACC ATGAAAGAAG CCGGTTTCGG ACGGATTATT AATGTTATTT CAACGTCCGT AAAACAACCT ATTGTGGGGC TGGGCGTTTC GAATACTATT CGGGGAGCGG TGGCGCAGTG GGCAAAAACA CTTTCGCTGG AGATTGCCCA CTTTGGCATT ACGGTCAATA ATGTGCTGCC TGGCTATACA GAAACGGCGC GTCTGGCCGC TGTACTCGCC ATGCGGTCGA AATCGTCGGG AAAGACAGAG GAAGAGGTCG CCAGACAAAT GGAGAGTGAA ATCCCGACCG GGCGTTTTGT CAAAGCCGAA GAGGTGGCAT CCGCTATCGC TTTCCTATGC ACCCCCGCGG CCGCGTCGAT CAACGGTATC AACTTACCGG TAGATGGCGG ACGAACGGGT AGCCTGTGA
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Protein sequence | MDLTLTGKTA LVCGSTQGIG RAAAVELALL GANIVLMARN EQTLRETLAE LDASQGQTHR YLVADFSQPG EAPAVLSQHL AQFPDVHILI NNTGGPAGGP LIAAKPDEFT QTFHNHLLNN QALVQAVFPT MKEAGFGRII NVISTSVKQP IVGLGVSNTI RGAVAQWAKT LSLEIAHFGI TVNNVLPGYT ETARLAAVLA MRSKSSGKTE EEVARQMESE IPTGRFVKAE EVASAIAFLC TPAAASINGI NLPVDGGRTG SL
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