Gene Slin_5821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5821 
Symbol 
ID8729596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7064162 
End bp7064719 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content52% 
IMG OID 
Productthioesterase superfamily protein 
Protein accessionYP_003390585 
Protein GI284040655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.380127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCA AGCCCGTCAG CCACTCCCAA ACTACCCTCA CTGAATTAAT GATTCCCTCT 
TACGCCAATT TCGGCGGTCG TGTTCACGGT GGTATTCTGC TGTCGCTCAT GGACAAAGTA
GCCTATGCCT GTGCTGCCAA ACACGCGGGG CAATATTGCG TTACGGTATC CGTAGATGGG
GTCAATTTCC GACAACCGGT CGAGGTGGGA GAACTGGTTT CGTTACTGGC ATCGGTCAAT
TATGTTGGAC GAACATCGCT GGTGGTGGGC ATTAAAGTGA TTGCCGAGAA TGTAAAGTCG
GGCACGGTGA AGCATACGAA CACGTCGTAC TTCACGATGG TCGCCAAAGA CGAGCACGAA
CGCCCTACCG AAGTGCCGCC CCTCCTGCTC GAAACAGTCG ACGACATCCG GCGCTTTCTG
GAAGCCATAA AACGTAAAGA ACTCCGGGCC TCCTACAGCG AACACTTCGA CAACGCTAAA
ACGCGTATGT TGCTGAACGA GAATATTGGC AAACTGGAAA AGGAAAGGTG TGAGCTGGCC
GACGGATTGG AACTGTAA
 
Protein sequence
MNAKPVSHSQ TTLTELMIPS YANFGGRVHG GILLSLMDKV AYACAAKHAG QYCVTVSVDG 
VNFRQPVEVG ELVSLLASVN YVGRTSLVVG IKVIAENVKS GTVKHTNTSY FTMVAKDEHE
RPTEVPPLLL ETVDDIRRFL EAIKRKELRA SYSEHFDNAK TRMLLNENIG KLEKERCELA
DGLEL