| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5806 |
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| Symbol | |
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| ID | 8729581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7049355 |
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| End bp | 7051067 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003390570 |
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| Protein GI | 284040640 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.10388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.882961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTCA ATATAGACTC CATAAAAGAC CAGACCTACG ATGCCATTGT CATCGGGTCG
GGTATATCGG GTGGCTGGGC CGCCAAAGAA CTGACCGAAA AAGGGCTTCG TGTGCTCATG
CTCGAAAAAG GGCATAAACT CGACCACGTA ACCGACTACG AATATGCCAT GAAAGACCCC
TGGCAGACCA AATACAACGG TCGGCTGACG GAAGAACAAA AGGAGTCGCA CCCGAAACTG
GCCCGCGATT ACCCGTACAA CGAAATGACC CAGAACTATT GGATGAAGGA TACGGATTCC
AATTATAAAG AAGTAAAGCG GTTTGACTGG TACCGGCCTA ATATCGTGGG CGGTAAGTCC
ATTATGTGGG GACGGCAGTC GTACCGGTTG AGCGACATCG ACTTTGAGGC CAACGCCCGC
GAAGGCATTG CCGTCGACTG GCCAATTCGC TACAAAGACG TGGCACCCTG GTACTCGTAT
GTCGAGAAGT TTGCCGGTAT TTCGGGCGAG AAGCTGAATC TGCCCCAACT GCCCGACAGC
GAGTTTCTGC CGCCGATGGA GATGTATTGC GTAGAGAAAG AAGTACGCAA GCGGATCGAG
AAGAACTTCC CCGGCCGGAC CATGACCATC GGGCGCGTAG CCAACCTGTC GAAAGCCGCT
CAGGCGCAGA TGGGCGTTGG CCGGGCCTCG TGCCAGTACC GCAACAAATG CTCGCTGGGT
TGCCCCTATG GCGCTTACTT CAGTACCCAG TCGTGTACAT TACCGCCAGC CGCCAAAACG
GGTCGGCTGA CCCTGCGTCC TGATTCCGTC GTGACGGAAG TTATGTACGA CGAGAATAAA
AAACGGGCAA CGGGCGTCCG CATCGTCGAT GCCGTGACCA TGCAGCCTAA AGAGTACTAC
GCCAACATCA TTTTCGTGTG TGGTAGTACG CTGGGTTCAA CAGCGGTGTT GCTCAACTCG
AAGTCGAACC GTTTCCCGAA CGGATTGGGT AATGATTCGG AACAGCTGGG CCATAACCTG
ATGGATCACC ACTTCCGCAT TGGTGCCTCC GGCGATTGGG AAGGCGATCT GGACAAGTAT
TACATCGGTC GCCGGGCCAA CGGCATTTAC GTACCCCGCT ACCGGAACAT TGGCAACGAC
AAGCGCGATT ACCTCCGTGG CTTTGGCTAC CAGGGTGGCG GGAGCCGCCA GGGCTGGCAG
CGCAACATTG CTGAAATGAG CTTCGGTGCC GATTACAAAG AAGAGCTCAC CAAACCCGGT
CCGTGGACAA TGGGCCTGGG TGGTTTCGGC GAAACATTGC CCTACTACGA AAACCGCATG
TACCTCGACA AAAACGAGAA AGACAAGTGG GGTATGCCGC TGGTGGTGTT CGATGCCGAA
CTGAAAGAGA ACGAGAAGAA AATGCGTATC GACATGATGA ACGACGCCAA AGAAATGCTG
GAATCGTCGG GCGTCAAGAA TGTCAAAGCG TATGACCGGG GTTCGTATCT GGGCATGGCT
ATTCACGAGA TGGGTACCGC CCGCATGGGT CGCGACCCGA AAACGTCGGT GCTAAACGGC
AACAACCAGA TGCACGCTGT CAAGAACGTT TTCGTAACGG ACGGCTCCTG CATGGTATCG
ACCTCCTGCG TAAACCCGTC ATTGACCTAC ATGGCCCTCA CCGCCCGCGC GGCTGACTTC
GCCGTGAAAG AAATGAAGCG GAAAAGTATT TAA
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| Protein sequence | MYLNIDSIKD QTYDAIVIGS GISGGWAAKE LTEKGLRVLM LEKGHKLDHV TDYEYAMKDP
WQTKYNGRLT EEQKESHPKL ARDYPYNEMT QNYWMKDTDS NYKEVKRFDW YRPNIVGGKS
IMWGRQSYRL SDIDFEANAR EGIAVDWPIR YKDVAPWYSY VEKFAGISGE KLNLPQLPDS
EFLPPMEMYC VEKEVRKRIE KNFPGRTMTI GRVANLSKAA QAQMGVGRAS CQYRNKCSLG
CPYGAYFSTQ SCTLPPAAKT GRLTLRPDSV VTEVMYDENK KRATGVRIVD AVTMQPKEYY
ANIIFVCGST LGSTAVLLNS KSNRFPNGLG NDSEQLGHNL MDHHFRIGAS GDWEGDLDKY
YIGRRANGIY VPRYRNIGND KRDYLRGFGY QGGGSRQGWQ RNIAEMSFGA DYKEELTKPG
PWTMGLGGFG ETLPYYENRM YLDKNEKDKW GMPLVVFDAE LKENEKKMRI DMMNDAKEML
ESSGVKNVKA YDRGSYLGMA IHEMGTARMG RDPKTSVLNG NNQMHAVKNV FVTDGSCMVS
TSCVNPSLTY MALTARAADF AVKEMKRKSI
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