Gene Slin_5786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5786 
Symbol 
ID8729561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7023038 
End bp7023667 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content50% 
IMG OID 
Productribosomal protein L4/L1e 
Protein accessionYP_003390550 
Protein GI284040620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.116422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTAA TCGTATATAA CAGCAAAGGC GAGGACACAG GCAAAAAGGT CACGCTTCCG 
GAAGAGGTTT TCAGTATTGA GCCGAACCAA CACGCGATTT ACCTCGACGT GAAACAATAC
CTGGCCAATC AACGTCAGGG AACGCACAAA GCGAAAGAGC GTGCTGAAAA TGCGCACTCA
ACTCGCAAAC TGAAGAAGCA AAAAGGTACA GGTGGTGCCC GCGCGGGTAG TGCCAAGTCG
CCGGTCTTCG TTGGTGGTGG TACCATTTTT GGTCCCCGTC CCCGCGATTA TAGCTTCAAA
CTGAACAAGA AAGTGAAAGC GCTGGCCCGC CAGTCGGCTT ACGCCGTTAA AGCAAAAGCT
GAGAAGATTT CAGTTATCGA CAGCATTGCG CTGGAAGCCC CCCGCACAAA GGATTACATC
CAGTTTCTGA ACGACCTGAA TGTAACCGGT AAGAAAACGC TGCTGATTCT GCCCGACGTA
AACACGAATG TTGTGTTGTC GAGCCGGAAT GTACAGAAGG CAAAGGTTAC AACAGCATCG
CAGGTTAATA CCTACGACCT GATGAACGCC GACCAACTGC TCATTAGCGA AGAAGCCCTG
TCAACCATTC AAACGTTGTT CGACAAATAA
 
Protein sequence
MEVIVYNSKG EDTGKKVTLP EEVFSIEPNQ HAIYLDVKQY LANQRQGTHK AKERAENAHS 
TRKLKKQKGT GGARAGSAKS PVFVGGGTIF GPRPRDYSFK LNKKVKALAR QSAYAVKAKA
EKISVIDSIA LEAPRTKDYI QFLNDLNVTG KKTLLILPDV NTNVVLSSRN VQKAKVTTAS
QVNTYDLMNA DQLLISEEAL STIQTLFDK