Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5781 |
Symbol | |
ID | 8729556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7020214 |
End bp | 7021122 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | ribosomal protein S3 |
Protein accession | YP_003390545 |
Protein GI | 284040615 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.336905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGACAAA AAATAAATCC AGTTGGCCTG CGACTTGGTA TTGTTCGGGG CTGGGAGTCG AGCTGGTACG GCGGCAAAGA GTTTTCGGAG AAACTTGTTG AAGACGAGAA AATCCGGAAA TACGTAGCAG CCCGTATCCC GAAAGGCGCC ATTGCGCGGG TCGTTATCGA GCGTACCCTG AAGCGCGTAA CCCTAACAAT CCATACGGCT CGTCCGGGTA TTGTTATCGG TAAAGGTGGT GGAGAGGTCG ACAAGATCAA AGAAGAGCTG AAAAAGATCA CGGGCAAAGA TGTCCAGATC AATATCTTCG AAATCAAACG CCCTGAAATC GATGCTAAAC TGGTTGGCGA AGCAATTGCC CAGCAGTTAC AGGCTCGTAT TTCGTTCCGT CGTGCCATGA AACAAGCTAT CCAGTCAGCG ATTCGGGTAG GTGCTCAAGG CATTAAAGTG AAAGTATCGG GTCGTTTGGG TGGTGCAGAA ATTGCCCGCT CGGAGCAATA TAAAGAAGGT CGTGTACCTC TTCACACGCT GCGTGCTGAT ATTGATTATG CTATCTCTGA GGCCCAAACC GTATACGGTA AAATCGGCAT CAAAGTATGG ATTTTCAAAG GTGAGGTTTA CGGTAAGCGT GATCTGTCTC CAGCAGCTAT GATGAGCCAG GCGCAAGCCG GTGAGCGTAC TGCTTCGGCA AACGATCGTG GCGACCGTCG TGGCCCACGT GGTGACCGTG ATGGCAATGA CCGCGGTGGT CGGGGCCGGG GCGGAGATCG CGGTGGTGAC CGGGGTGGCA ATCGCGGTGG TGCAGGTGCA GGTGGCCAGG GCGGTAATCG TGGTGGCGGC CAGGGCGGCA ACCGCGGTGG CGCTGGCGGT CAGGGTGGCA ACCGCGGTGG TGGCGGACCA AGACGATAA
|
Protein sequence | MGQKINPVGL RLGIVRGWES SWYGGKEFSE KLVEDEKIRK YVAARIPKGA IARVVIERTL KRVTLTIHTA RPGIVIGKGG GEVDKIKEEL KKITGKDVQI NIFEIKRPEI DAKLVGEAIA QQLQARISFR RAMKQAIQSA IRVGAQGIKV KVSGRLGGAE IARSEQYKEG RVPLHTLRAD IDYAISEAQT VYGKIGIKVW IFKGEVYGKR DLSPAAMMSQ AQAGERTASA NDRGDRRGPR GDRDGNDRGG RGRGGDRGGD RGGNRGGAGA GGQGGNRGGG QGGNRGGAGG QGGNRGGGGP RR
|
| |