Gene Slin_5781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5781 
Symbol 
ID8729556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7020214 
End bp7021122 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content55% 
IMG OID 
Productribosomal protein S3 
Protein accessionYP_003390545 
Protein GI284040615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.336905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAAA AAATAAATCC AGTTGGCCTG CGACTTGGTA TTGTTCGGGG CTGGGAGTCG 
AGCTGGTACG GCGGCAAAGA GTTTTCGGAG AAACTTGTTG AAGACGAGAA AATCCGGAAA
TACGTAGCAG CCCGTATCCC GAAAGGCGCC ATTGCGCGGG TCGTTATCGA GCGTACCCTG
AAGCGCGTAA CCCTAACAAT CCATACGGCT CGTCCGGGTA TTGTTATCGG TAAAGGTGGT
GGAGAGGTCG ACAAGATCAA AGAAGAGCTG AAAAAGATCA CGGGCAAAGA TGTCCAGATC
AATATCTTCG AAATCAAACG CCCTGAAATC GATGCTAAAC TGGTTGGCGA AGCAATTGCC
CAGCAGTTAC AGGCTCGTAT TTCGTTCCGT CGTGCCATGA AACAAGCTAT CCAGTCAGCG
ATTCGGGTAG GTGCTCAAGG CATTAAAGTG AAAGTATCGG GTCGTTTGGG TGGTGCAGAA
ATTGCCCGCT CGGAGCAATA TAAAGAAGGT CGTGTACCTC TTCACACGCT GCGTGCTGAT
ATTGATTATG CTATCTCTGA GGCCCAAACC GTATACGGTA AAATCGGCAT CAAAGTATGG
ATTTTCAAAG GTGAGGTTTA CGGTAAGCGT GATCTGTCTC CAGCAGCTAT GATGAGCCAG
GCGCAAGCCG GTGAGCGTAC TGCTTCGGCA AACGATCGTG GCGACCGTCG TGGCCCACGT
GGTGACCGTG ATGGCAATGA CCGCGGTGGT CGGGGCCGGG GCGGAGATCG CGGTGGTGAC
CGGGGTGGCA ATCGCGGTGG TGCAGGTGCA GGTGGCCAGG GCGGTAATCG TGGTGGCGGC
CAGGGCGGCA ACCGCGGTGG CGCTGGCGGT CAGGGTGGCA ACCGCGGTGG TGGCGGACCA
AGACGATAA
 
Protein sequence
MGQKINPVGL RLGIVRGWES SWYGGKEFSE KLVEDEKIRK YVAARIPKGA IARVVIERTL 
KRVTLTIHTA RPGIVIGKGG GEVDKIKEEL KKITGKDVQI NIFEIKRPEI DAKLVGEAIA
QQLQARISFR RAMKQAIQSA IRVGAQGIKV KVSGRLGGAE IARSEQYKEG RVPLHTLRAD
IDYAISEAQT VYGKIGIKVW IFKGEVYGKR DLSPAAMMSQ AQAGERTASA NDRGDRRGPR
GDRDGNDRGG RGRGGDRGGD RGGNRGGAGA GGQGGNRGGG QGGNRGGAGG QGGNRGGGGP
RR