Gene Slin_5748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5748 
Symbol 
ID8729523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6991128 
End bp6991796 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content55% 
IMG OID 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003390512 
Protein GI284040582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCAA TCCCGGTTTT GATTTTCCTC CTGATGACCA GCTTTCTGCC AACCGCACCC 
AAGGCCAACT ACACATTCCT ATCCCTCGGC GATTCGTACA CCATTGGCGA GAGCGTAGCC
GAACAAGACC GCTGGAGCGT TCAACTGGCC GGTATGCTGC GTAAGGAGGG AATCGATGTG
GCGAGCCCGG CAATCATTGC CAAAACAGGC TGGACTACGG CCGAATTGCA GGAGGCTGTT
AAAGTTAGCG GTAACCGGAA TACGTATAGC CTGGTTTCGT TGCTGGTTGG CGTCAATAAT
CAATACCGGG GGCAGAGTCA GGAACGCTAC CGAACCGAAT TTCGGGAATT GCTGCAAACG
GCAGTACAGT ATACAGGCGG CAAGTCGGCA CGCGTCTTCG TGCTGTCTAT TCCGGACTGG
GGCGCTTCTC CCTTTGCGGC TGGTCGGGAT AGGAACAAGA TAGCCCGTGA GATTGACCAG
TTCAACACCA TTGCGAAAGA GGAGTGTCAG AAGGCGGCCA TTGCGTATGT CGACATTACC
CCACCGACCC GCTCTGCTAC CGGCGACGAA AGTCAGTTCG CATCGGACGG CCTTCATTAC
TCAGGAAAGC AGATGAAACT GTGGGCCGAA CGAGCCCTGC CGGTGGCAAA AAAGTTGCTG
ACCGACTAA
 
Protein sequence
MVAIPVLIFL LMTSFLPTAP KANYTFLSLG DSYTIGESVA EQDRWSVQLA GMLRKEGIDV 
ASPAIIAKTG WTTAELQEAV KVSGNRNTYS LVSLLVGVNN QYRGQSQERY RTEFRELLQT
AVQYTGGKSA RVFVLSIPDW GASPFAAGRD RNKIAREIDQ FNTIAKEECQ KAAIAYVDIT
PPTRSATGDE SQFASDGLHY SGKQMKLWAE RALPVAKKLL TD