Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5720 |
Symbol | |
ID | 8729495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6957694 |
End bp | 6958800 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003390484 |
Protein GI | 284040554 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00463095 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACAGT TTATCATTCC GGTTCTACTC GGGCTCGGCC TGGCCGCTGG CTGTCAGAAA AAAGAAAATG CGAAGGGCGT CGATACCGGC GATCTGGATA GCGCCAAAGA GACCGTTTCG ACGGTAGGTG ATCCCAAACT CCTGTACACG CTGCCCACCA ACTACAACAC GCCCGATGGT ATGGCGCTGG CTCCCGACGG CACGGTCTAT CTGTCCGTTC CCAACCTGGC CGACAACAGC TACCCCGGCG TTATCGTGAC GTTTGCCGCC GACTCGGTGA AGTTCTTCAC CAGCCTGCCC GTTCACCCCG ATACCAAACA TGCCTGCCCG ATGGATTTGG CGTTCGGCCC CGACGGTAAC TTATATTATG CCGACAACCA GTACGAAAAC GACAAAAATT ACAAATCCCG GCTGATGCGG GTTAAGATGA GTGGAGGTAA AGCCGTAAGC GTGGAGCCGG TCGTGACGGG CTTCGGTTTG TCGAATGCGG TGGTCTGGAA GGGCAACACC GTTTACGTGA CCGACAGCCA GTGGGATATG CCCGATAACG ATAAGGGCAG CGCCGTCTTC CATTTTACGC TCGATGAACT GAACAAAGGC GTGGTGGCCC TGAAACCCAA AACGATGGAC CCGCACGTGC TGGCGACTTT TACCACGACG GTAAACGAAA CGGGCGTCGA CAATGGGGCC GATGGACTGG ACTACGACAG CAAAGGAAAT TTCTATACCG GCTCGTTCGG CGATGGCACG CTTTACAAAA TGACCCTCAA ACCCGATGGT TCGCTGGCCT CGAAAGAAGT GGTGAAGGTA AGCGAACCGA TTGCCTGCGT AGATGGCCTG ATCGTGGACC GCAAAACGGA CAAGATCTAC CTCTGCAACT CACGTATGAA CTCGATACAG ACCGTAACGC CTGATGGCAA GGTGAGTACA CTAGTGCAGA ACGGCGACAC CGATGGCAAA GACGGCCGAA TCGATCAACC CGCCGAAGTG CTGCTAAAAG GCAACCGCCT GTTCATCACC GACTACGACA AACCAGAAAA GAAGTTCGTC AACACAAAAG CCGACGATGT GCATACGATG TCGTATGTTG ATCTGGTGAA TCAGTAA
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Protein sequence | MKQFIIPVLL GLGLAAGCQK KENAKGVDTG DLDSAKETVS TVGDPKLLYT LPTNYNTPDG MALAPDGTVY LSVPNLADNS YPGVIVTFAA DSVKFFTSLP VHPDTKHACP MDLAFGPDGN LYYADNQYEN DKNYKSRLMR VKMSGGKAVS VEPVVTGFGL SNAVVWKGNT VYVTDSQWDM PDNDKGSAVF HFTLDELNKG VVALKPKTMD PHVLATFTTT VNETGVDNGA DGLDYDSKGN FYTGSFGDGT LYKMTLKPDG SLASKEVVKV SEPIACVDGL IVDRKTDKIY LCNSRMNSIQ TVTPDGKVST LVQNGDTDGK DGRIDQPAEV LLKGNRLFIT DYDKPEKKFV NTKADDVHTM SYVDLVNQ
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