Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5601 |
Symbol | |
ID | 8729375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6816476 |
End bp | 6818770 |
Gene Length | 2295 bp |
Protein Length | 764 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | UvrD/REP helicase |
Protein accession | YP_003390365 |
Protein GI | 284040435 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGATT ATATTTCAGG ATTAAATGAC CCCCAGCGGG AAGCCGTGAT GCACGGCAGC GGCCCGCTGA TGATTATAGC CGGAGCGGGT TCGGGGAAAA CCCGCGTATT GACGTACCGC ATTGCTCACC TGATCGAAAA CGGCGTTGAC CCGTTCCGCA TTCTGTCGCT GACGTTTACC AACAAGGCGG CCGGCGAGAT GCGCAACCGA ATTGAAAAGG TAGTCGGTAC CGAAGCCCGC AACATCTGGA TGGGCACGTT CCACTCCGTT TTTGCCAAGA TTTTACGCAT CGAAGCCAAA GCCATTGGCT ATACCAGTAA CTTCTCCATT TACGATACCG ACGACTCCAA GTCGCTCCTG CGCAGTATTG TGAAAGAGAT GGCGCTGGAT GATAAAGTGT ACCGGGTCAA CAGCGTTTTT AGCCGTATAT CCGGCGCCAA AAACCGCCTG ATCGGACCGG AAGACTACAT CAATAATGCG GTTATTCAAG CCGACGATGA ATCCGCCCGG ATGCCGCATA TTGGCAAGAT CTACAAACAG TACGCGCTGC GGTGTTTTGC CGCCAACGCC ATGGATTTCG ACGATCTGCT GTTCAACACC AATGTGCTGT TCCGCGATCA TCTGGATATA CTGCACAAGT ACCAGCACAA GTTTCAGCAC GTGATGGTCG ATGAGTTTCA GGATACGAAC GTTTCCCAAT ACCTCATCAC CCGTAAACTG GCCGCCGTTC ATCAGAACAT CTGTATCGTA GGCGACGATG CCCAGAGTAT CTACGCCTTC CGGGGTGCTA ACATCGAGAA CATCCTCAAC TTCCAGCGCG ATTATGGCAA AGAAAATGTC AAAATCGTAA AGCTGGAACA GAACTACCGT TCTACCAAGA CGATTGTAGA GGCCGCGAAC TCCATTATTT CCCGGAATAA AAACCAACTG GAGAAATCAG TCTTTACGGC CAATGAAGAC GGACCGCTCA TCGACCTGAT CAAAGCCTCG TCGGATAACG AAGAAGGGCG ACTGGTAGCC TCGTCCATTT TCGAAGCGAA GATGAACGAG TCGCTGACGA ACAACGATTT CGCCATTCTG TACCGGACCA ACGCCCAGTC GCGGGCCTTT GAGGAAGCCC TGCGTAAAGT GAGCATTAAG TACCGTATCA TCGGCGGTCT GTCGTTCTAC CAGCGGAAAG AAATTAAGGA TTTAATTGGC TACCTGCGTT TTACGGTCAA TCAGCAGGAC GAGGAAGCGT TCAAGCGGAT TATCAACCTC CCCAAGCGTG GTATCGGTGA CACAACCGTT GCAAAAATCA GTGTTATTGC GGCCGAGAAG CAGGAATCCA TCTGGGAGAT TGTTGCCAAC ATTGGTCAGC ACGTGGCCGG TCGCTCGGCG ATTCCGATTG AAGGGTTCGC GAATTTGATC AAGAGCTATA AACTGCTGCT CGATCAGAAA GATGCGTTTG AGGTAGCCTC GCACATTGCC AAAACGTCGG GTCTGCTCAA AGAACTGTAC GACGACAAAA CCGTTGAAGG GCTGGCCCGG TACGAAAACG TGCAGGAATT GCTGAACGCC ATCAAGGAAT TTGTCGACAA TCCGGATAAC GAGGAAAAGA GCCTGAGTGC ATTTCTTCAG TCCGTTTCGC TGCTAACCAC CGCCGACGAA AAAGAGGACG ATGGCGACAA TGATAAGGTG ACGCTGATGA CCATCCACGC AGCCAAAGGC CTTGAGTTCA AAAACGTCCA TATTGTTGGA CTGGAAGAAG ATTTATTCCC GAGCCAGATG ATGCTCGAAA GCCGCAGCGA TCTGGAAGAA GAACGGCGTC TGTTTTACGT AGCCATTACC CGCGCCGAAA AACGCCTGAC GGTATCGTAC GCCGAAACGC GTTACCATTA CGGCCGACTG AAAATGTGCG AACCAAGCCG GTTTCTGATG GAAATCGACC AGAAGTACAT GAAGATGTCT AAACTTCGGT CGGCACCAAG CCGGACAGAT TTCGACCGGC CTGAACGCGA CCGTAGTGAA AGCACGTCGA CGGGATCGAT GAGTTTTGTT CGGTCGCTGG CACAGAAAAC GGCCCGTTCG CAGGCGCCCC AACCAACGGT TTCGCACACG CCCTCCGCCG ACTTTGCGCC TACCAGCACG GCCGAACTGG CAGCGGGCCA GCGGGTCGAG CACGCGAAAT TCGGGTTTGG CACGGTTAAA GCTGTAGATG TTAATGGAAC AGAGCGTAAA GCAACGATTG CCTTCGAGAA AGCGGGTGAG AAAGTGCTAC TGCTGAGTTT CGCGAAGCTG CGGGTAGTGG CGTAA
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Protein sequence | MVDYISGLND PQREAVMHGS GPLMIIAGAG SGKTRVLTYR IAHLIENGVD PFRILSLTFT NKAAGEMRNR IEKVVGTEAR NIWMGTFHSV FAKILRIEAK AIGYTSNFSI YDTDDSKSLL RSIVKEMALD DKVYRVNSVF SRISGAKNRL IGPEDYINNA VIQADDESAR MPHIGKIYKQ YALRCFAANA MDFDDLLFNT NVLFRDHLDI LHKYQHKFQH VMVDEFQDTN VSQYLITRKL AAVHQNICIV GDDAQSIYAF RGANIENILN FQRDYGKENV KIVKLEQNYR STKTIVEAAN SIISRNKNQL EKSVFTANED GPLIDLIKAS SDNEEGRLVA SSIFEAKMNE SLTNNDFAIL YRTNAQSRAF EEALRKVSIK YRIIGGLSFY QRKEIKDLIG YLRFTVNQQD EEAFKRIINL PKRGIGDTTV AKISVIAAEK QESIWEIVAN IGQHVAGRSA IPIEGFANLI KSYKLLLDQK DAFEVASHIA KTSGLLKELY DDKTVEGLAR YENVQELLNA IKEFVDNPDN EEKSLSAFLQ SVSLLTTADE KEDDGDNDKV TLMTIHAAKG LEFKNVHIVG LEEDLFPSQM MLESRSDLEE ERRLFYVAIT RAEKRLTVSY AETRYHYGRL KMCEPSRFLM EIDQKYMKMS KLRSAPSRTD FDRPERDRSE STSTGSMSFV RSLAQKTARS QAPQPTVSHT PSADFAPTST AELAAGQRVE HAKFGFGTVK AVDVNGTERK ATIAFEKAGE KVLLLSFAKL RVVA
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