Gene Slin_5591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5591 
Symbol 
ID8729365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6806812 
End bp6807672 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content55% 
IMG OID 
ProductPirin domain protein 
Protein accessionYP_003390355 
Protein GI284040425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC AACGTACAAT TTCAACTATA CGAACGGCCA CCCCGAACAG CGTGGGGGAC 
GGCTTTATTG GGTTAAATGC TTTCCATCCA CAAGGGTCGC GTCCGTTCAA TCCGTTTTTA
TTACTGGATC ACCACGGTCC CATGCAGGTT CAGCCGTCGG AACGACCAAA AGGTGTCGAT
CAGCACCCGC ACCGGGGCTT CGAAACTGTA ACGATCGTGT ATGAAGGGGC CCTCGAACAC
CGGGACTCCG CCGGTAATAA AGGCAAACTC TTCTCGGGCG ATGTACAGTG GATGACGGCA
GCTTCGGGGA TTATCCACGA AGAGAAACAC GAACGCGAGT TTTCGCGTCA GGGTGGCCGA
CTCGACTTTG TGCAATTGTG GGTCAATCTA CCCGCCAAAG ACAAAATGAG CCCACCGCGT
TACCAGGACA TTGCCTCCTC CCGAATTGCC ACAGCCACCT TGCCCGGTGG TGGTGCATTC
CGGGTAATTG CGGGCGATGT GGCTGGCTTA CACGGTCCCG CCAATACATT TAGCCCGATT
GTCGTCGCCG ATTTAGCCCT GACCAGTGGT CAATCCGAAA CGCTTGTTAT ACCGGCTAGC
TATAACCTGA TGGTGTATGT ATTAAGTGGA GAGGCAACCC TTAATGACGC CAGCCTGACC
CGGGGTCAGA TAGCCCTTAC AAACCCCGAC GGCGACACGA TTACGGTATC GACCGCAACG
GGTGCCAAAG TTCTTATACT AGCCGGAGAG CCGATCCAGG AACCGCTGGC CGTGTACGGG
CCTTTTGTCA TGAACACCCG TGAGGAGATC ATGGCCGCTT TTGACGATTT TCAGAACGGG
CGGATGGGGT CGTTAAATTA A
 
Protein sequence
MSTQRTISTI RTATPNSVGD GFIGLNAFHP QGSRPFNPFL LLDHHGPMQV QPSERPKGVD 
QHPHRGFETV TIVYEGALEH RDSAGNKGKL FSGDVQWMTA ASGIIHEEKH EREFSRQGGR
LDFVQLWVNL PAKDKMSPPR YQDIASSRIA TATLPGGGAF RVIAGDVAGL HGPANTFSPI
VVADLALTSG QSETLVIPAS YNLMVYVLSG EATLNDASLT RGQIALTNPD GDTITVSTAT
GAKVLILAGE PIQEPLAVYG PFVMNTREEI MAAFDDFQNG RMGSLN