Gene Slin_5551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5551 
Symbol 
ID8729325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6759777 
End bp6760808 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content53% 
IMG OID 
Productpeptidase M28 
Protein accessionYP_003390316 
Protein GI284040386 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAT CATCTTTATT TCTCGTTCCG GCCCTGCTAC TCCTGACGGC TGGTGCCTGC 
CGAACCAAGC AGTCGCAAAC CGACGCTACC CAGACCACTG AGCAACCCGC TATGGCTTCG
GCACCGGCTT TCAACGCCGA TTCGGCCTAT GCGTATGTAG ACCAGCAGGT GAAGTTCGGA
CCACGGGTGC CCAACACACC CGCGCATGTA CAAACCGGCA ATTACCTGGC CGATAAGCTC
AGGCAGTTTG GTTGTGAGGT GACGGAACAA ACATTTGTGG CAACCACCTG GGACGGCAAG
AAGCTGAATG CCCGCAACAT TATTGGGGCT ATCAACCCCA AAGCAACAAA GCGGATTGTG
CTGGCCTCAC ATTGGGATTC GCGCCCTCAT GCTGATGCCG ACGAAGATAA AGCGGATCAG
AACAAGCCCG TGACGGCCGC CAACGACGGA GCCAGTGGTG TTGGCGTTTT GCTCGAACTG
GCGCGTACCA TTCAGCAAAG TCAGCAAAAG CCCTCCGTTG GTATTGACAT TATTTTCTTC
GATGCCGAAG ACTGGGGTAA CGGAGAAAAA GCCGCCGGTG ACTTTGAGAA AGAAAGTGGT
AATCAGTACG ATTACATCGG TTTCTGCCTG GGTTCCCGCC ATTGGGCGAA AAACCTGCAT
AAACCAGGCT ACTCCGCTTA TTACGGCATC CTGCTGGACA TGGTTGGTGC CAAAGGTGCT
ACGTTTGCCA AAGAAGGACT CTCCATGCAG TTTGCGCCGA CGGTGGTCAA TAACGTTTGG
CAAACAGCCA GCCGGGCGGG TTATAGTCAG TATTTTATCG ACACACCCGG TGGCCAAATC
ACCGACGACC ACCTGGCTCC GAATACCATC GCCAAGATTC CGATGATTGA CATTATTCAT
ACAAACATCG GTTCGGGCGG CTTTTTTCCT GCCTGGCATA CTGCCGAAGA TAACATGAGT
AATATTGACC GGGGCACGCT TAAAGCCGTT GGGCAAACGC TGCTACAAGT ACTTTACAAC
GAGCAACAAT AA
 
Protein sequence
MTKSSLFLVP ALLLLTAGAC RTKQSQTDAT QTTEQPAMAS APAFNADSAY AYVDQQVKFG 
PRVPNTPAHV QTGNYLADKL RQFGCEVTEQ TFVATTWDGK KLNARNIIGA INPKATKRIV
LASHWDSRPH ADADEDKADQ NKPVTAANDG ASGVGVLLEL ARTIQQSQQK PSVGIDIIFF
DAEDWGNGEK AAGDFEKESG NQYDYIGFCL GSRHWAKNLH KPGYSAYYGI LLDMVGAKGA
TFAKEGLSMQ FAPTVVNNVW QTASRAGYSQ YFIDTPGGQI TDDHLAPNTI AKIPMIDIIH
TNIGSGGFFP AWHTAEDNMS NIDRGTLKAV GQTLLQVLYN EQQ