Gene Slin_5544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5544 
Symbol 
ID8729318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6755069 
End bp6755872 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content52% 
IMG OID 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_003390309 
Protein GI284040379 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA CTGAAAAGAC ATATAAAGTA CCAACTATGG CCGATATGGC CGCTTCCGGC 
GAAGAACCCG AAATTCTGTT TTGGGTTGGA TGTGCTGGCT CGTTTGATGA CCGCTACAAA
CGCGTAACCA TTGCCTTCGT TCGTATCCTG AACCATGTAG GGATCAAGTT CGCCGTATTG
GGACCGGAAG AAGGTTGTAC CGGCGACCCG GCCCGACGTG CCGGAAATGA GTTTTTGTTT
CAAATGCAGG CCATGTCCAA CATTCAGGTG CTGAACGGTT ACAACGTCAA GAAAATCGTG
ACAGCCTGTC CGCATTGCTT CAATACGCTT AAAAACGAAT ACCCTGAGTT GGGCGGTAAC
TACGAAGTCA TTCACCACTC GCAGTTCTTA CAGGGCCTGA TCAATGAGGG ACGGGTGCGG
GTGAAAGATG GTGAGTCGTT TAAAGGGCGT CGGATTACCT TTCATGACTC CTGCTACCTG
GGTCGTGCCA ACAAAATATA CGAAGCGCCC CGTGAGGTTC TGGCCGCCCT AGATGCCGAT
CTGGTCGAGA TGAAGCGCGT TCGCGCCAAT GGACTCTGCT GCGGTGCGGG TGGTGGTCAA
TATTTTAAAG AACCGGAGCC GGGTAAGAAA GATGTAAACG TTGAACGGGT TGAAGAAGCA
CTTGGCACCG GTGCCGATAC CATCGCTGTG GCATGTCCGT TCTGTATGAC AATGATGTCG
GACGGCGTTA AGAACAAGAA TAAAGAAGAT TCCGTCCGCG TCTACGACAT CTCGGAACTC
ATCGCCCAGG GGCAGGGGTT GTAA
 
Protein sequence
MMTTEKTYKV PTMADMAASG EEPEILFWVG CAGSFDDRYK RVTIAFVRIL NHVGIKFAVL 
GPEEGCTGDP ARRAGNEFLF QMQAMSNIQV LNGYNVKKIV TACPHCFNTL KNEYPELGGN
YEVIHHSQFL QGLINEGRVR VKDGESFKGR RITFHDSCYL GRANKIYEAP REVLAALDAD
LVEMKRVRAN GLCCGAGGGQ YFKEPEPGKK DVNVERVEEA LGTGADTIAV ACPFCMTMMS
DGVKNKNKED SVRVYDISEL IAQGQGL