| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5540 |
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| Symbol | |
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| ID | 8729313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6748843 |
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| End bp | 6750648 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | ABC transporter related protein |
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| Protein accession | YP_003390305 |
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| Protein GI | 284040375 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.27279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAC GGGGAAGAAG TTTTGGCGAG GAAGCCAACG AAGAGGATAA AAAGAAAATC
AGTCGCGAAG GCTTTAAAAA GGCACTGAGC ATATTTCGGT TTGTAAAACC CTATCGGTTT
CAGTACATCA TTGGTTTTGT GTTCCTGATC CTGTCGACGG GCACGACGAT GAGTTTCGGT
TTGCTCATTG GGCAAATCAC GAGCGTGATA CAGGGAAAGT CGGCGTTTAC ACTCAATCAG
GTCACGCTGT TTTTTGTGGG CGTGCTGGTA GCGCAGGCTA TTTTCTCATT TTTTAGGATC
TACTTTTTCT CACAAGTAAG TGAGCGGGCC ATGGCCGATG TGCGTCGGGC GGCTTACAGC
AAGATCATTA CCCTGCCGAT TCCGTTTTTC GAGCAACGGC GCGTAGGCGA ATTAACCAGC
CGGATCTCGG CCGATATTTC GCAGTTACAG GATGTACTGA CGCTGACCGT AGCCGAATTG
TTCCGGCAAG TTGGCACACT CACCATTGGT ACGGCTATCA TTTTTTACGT TTCCTGGAAG
CTGACGCTGT TTATGCTGGC AACCTTTCCG GTTATCATTG TGGCGGCAAT GGTCTTTGGC
CGGTTTATCC GTAAACTGTC AAAACAGGCG CAGGATTTGC TGGCGCAGAC CAACATTATC
GTGGAGGAGA CCCTCCAGTC GGTAAATGTA GTGAAGGCAT TTACCAACGA AAAACTGGAA
ATCAACCGGT ACGGAACAGC ACTGGAGCGG GTGGTCAATA CCGCACTGCG GGCGGCACGG
TTCCGGGGGG TATTTGTCTC GTTCGTGATT TTCGCCCTCT TTGGCGGTAT TATCGGGGTT
GTCTGGTACG GTGGTTCGCT GGTGATTTCC AACGAGATGC CGTTTGCTGA CCTGCTGACG
TTTATCGTTT ATACAACCTT CATTGGCGGG TCGGTAGCCG GTATGGGCGA TTTATACGCT
CAGTTGCAAA AGACAATTGG TGCCTCGGAG CGGATTCTGG AAATTCTGGA GGAGCCATCT
GAAGTAAATG CTGCCGAAGA AACACCGTTG TTTGTACCCG TACTTGGTAA TGTTCAGTTC
AACGATGTCC GGTTCTCGTA CCCATCCCGC CCGGATGTGC CCGTATTGAA AGGCATCACG
CTCAATGTTG CCGCCGGTCG GAAAATTGCG CTGGTGGGTC AGAGCGGAGC CGGAAAATCG
ACGATTGTTC AGTTGCTGAT GCGGTATTAC CAAATTGGCG GTGGCCAGAT TACAGTAGAC
GGCCGCGATT TATCAGGCTT CAACGTAACG GAATTACGCA AAAATATTGC TGTGGTACCA
CAGGAAGTCA TGCTCTTTGG CGGAACCATC CTCGAAAACA TTCAGTACGG TAAACCCGGC
GCATCGGAAA CCGAAGTGCG CGAAGCCGCC CGCAAAGCCA ATGCGCTCCA GTTCATCGAC
TCCTTCCCCG AAGGATTGCA AACCATTGTT GGCGAGCGTG GAGTTAAACT ATCCGGTGGC
CAGCGGCAGC GGATTGCCAT TGCCCGCGCT ATTCTGAAAG ATCCTGCCAT TCTGATTCTT
GATGAAGCCA CAAGCTCACT CGATGCCGAA TCGGAGCGGC TCGTTCAGGA AGCACTGGAC
ATCTTGATGC AGAACCGGAC AACGATCATC ATTGCTCACC GGCTGGCTAC CATCCGCAAA
GTGGATATGA TCTATGTGAT GCGCGAAGGA CAGATTGCCG AAGCAGGTAC CCACGACGAA
TTGGCTACCC AGGAAGACGG CATCTACGCG AATCTGGTCA AACTACAGTT CGAAACGATA
GAATAA
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| Protein sequence | MAKRGRSFGE EANEEDKKKI SREGFKKALS IFRFVKPYRF QYIIGFVFLI LSTGTTMSFG
LLIGQITSVI QGKSAFTLNQ VTLFFVGVLV AQAIFSFFRI YFFSQVSERA MADVRRAAYS
KIITLPIPFF EQRRVGELTS RISADISQLQ DVLTLTVAEL FRQVGTLTIG TAIIFYVSWK
LTLFMLATFP VIIVAAMVFG RFIRKLSKQA QDLLAQTNII VEETLQSVNV VKAFTNEKLE
INRYGTALER VVNTALRAAR FRGVFVSFVI FALFGGIIGV VWYGGSLVIS NEMPFADLLT
FIVYTTFIGG SVAGMGDLYA QLQKTIGASE RILEILEEPS EVNAAEETPL FVPVLGNVQF
NDVRFSYPSR PDVPVLKGIT LNVAAGRKIA LVGQSGAGKS TIVQLLMRYY QIGGGQITVD
GRDLSGFNVT ELRKNIAVVP QEVMLFGGTI LENIQYGKPG ASETEVREAA RKANALQFID
SFPEGLQTIV GERGVKLSGG QRQRIAIARA ILKDPAILIL DEATSSLDAE SERLVQEALD
ILMQNRTTII IAHRLATIRK VDMIYVMREG QIAEAGTHDE LATQEDGIYA NLVKLQFETI
E
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