Gene Slin_5522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5522 
Symbol 
ID8729290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6723406 
End bp6724713 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content44% 
IMG OID 
Productthreonine synthase 
Protein accessionYP_003390287 
Protein GI284040357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000125532 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.439141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTT ACAGCACTAA TAGTCCGTCT GTTACTGTCT CTACCGAGCA GGCTTTGTTT 
CAAAGTATGC CTGCTGACAA AGGGCTTTAT ATGCCTGCTC CGCTGCCCTA TCTCGGCGCT
GACTTTTTTT CGGCCATTGC AGATCAATCG TTGGCTGACA TAGGCTTTGC TATTAGTCAG
GCGTTGTTTG GCGATGAAAT AAGCAAGTCA GATTTAGAAG ATCTAACACA TCATGCGTTT
CCCTTCTCTA CACCAGTTAT AGAATTAGAG GCAGGTAAGG TTGGGGTTTT GGAGTTGTTT
CACGGACCTT CGCTTGCGTT TAAGGACGTG GGCGCCCGTT ATATGGCGGG CTTAATGTCC
TATTTTTCGA AACAAACGGA TAAAGAGGTA AATATTCTGG TTGCTACATC GGGCGATACA
GGTGGTGCTG TTGCTATGGG TTTTCATAAC GTTCCGGGTG TTCGAGTATC TATTCTTTAT
CCTAGCGGTC GAGTTAGTGA ATTACAGGAG AAACAATTGA CAACGCTTGG TGGGAATATC
CAGGCATTTG AAGTAAATGG CTCTTTCGAC GATTGTCAGG CCATTGTAAA ACAGGCTTTC
GTTGATGCTG AGTTGAATGC TCATCTTTCT CTGTCTTCGG CCAATTCAAT TAACATTTTC
CGTCTTATTC CCCAAGGCTT TTATTACGTG AGTGCCTTTG GTCAAGTCAG ATCTTCCGGT
AAACCTGTAG TGTTTTCTAC TCCTAGTGGT AACTTCGGAA ATCTGAGTGC TGGCGCGCTC
GTACAAAAAA TGGGATTACC AGTTTCTCAT TTTGTAGCGG CTACTAACCT CAACCATGTG
GTTCCGAACT ACCTTAAGAC AGGGGACTAT GTTCCGAAAG CATCTATAGC TACCATTTCA
AACGCCATGG ACGTAGGAAG CCCGAGTAAT TTTACAAGGC TCTCTCATCT ATATGATGAT
CGCTACGATC AGTTTAAAGC CAACGTTTCG GGCTACTTTT TTGATGATGA CGAAACCAGA
GCCGGGATGA AACGTATTTA TGAGACATAC AACTATGTAT CCTGCCCTCA TACCGCTATT
GGTATTATGG GTTTAGAAAA ATACCTGGCT GATACCAAAC AAGATATTAC CGGTGTTGCT
CTAGCAACAG CTCATCCTTC AAAGTTTAAG CCACTTGTAG AAGAAGTTTT AAATGTTTCC
GTTGAGGTTC CAGACAGGCT TGCAGAATTG GCCCAGCGAG AAAAGAATAG CATTCGAATC
TCTGCGAACT ATGCTGATTT TAAAGAGTCT TTCTTACAGA CAGTGTAA
 
Protein sequence
MRFYSTNSPS VTVSTEQALF QSMPADKGLY MPAPLPYLGA DFFSAIADQS LADIGFAISQ 
ALFGDEISKS DLEDLTHHAF PFSTPVIELE AGKVGVLELF HGPSLAFKDV GARYMAGLMS
YFSKQTDKEV NILVATSGDT GGAVAMGFHN VPGVRVSILY PSGRVSELQE KQLTTLGGNI
QAFEVNGSFD DCQAIVKQAF VDAELNAHLS LSSANSINIF RLIPQGFYYV SAFGQVRSSG
KPVVFSTPSG NFGNLSAGAL VQKMGLPVSH FVAATNLNHV VPNYLKTGDY VPKASIATIS
NAMDVGSPSN FTRLSHLYDD RYDQFKANVS GYFFDDDETR AGMKRIYETY NYVSCPHTAI
GIMGLEKYLA DTKQDITGVA LATAHPSKFK PLVEEVLNVS VEVPDRLAEL AQREKNSIRI
SANYADFKES FLQTV