Gene Slin_5519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5519 
Symbol 
ID8729287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6718194 
End bp6720056 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content46% 
IMG OID 
Productglucose inhibited division protein A 
Protein accessionYP_003390284 
Protein GI284040354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.262769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTCTT CGTACGATGT CATTGTAGTA GGAGCTGGCC ATGCTGGATG TGAGGCAGCA 
AATGCTGCAG CCACCATGGG CTCAAAAGTT TTGCTGATTA CAATGAACAT GCAAACTATT
GCACAAATGT CCTGCAACCC TGCTATGGGG GGTGTAGCTA AAGGACAGAT TGTTCGTGAA
GTTGATGCGC TAGGCGGGCT ATCAGGGATA ATAAGCGATA AAAGCATGAT TCAATTTCGC
ATGTTAAACC GCTCAAAAGG TCCTGCCATG TGGAGCCCGC GTTGTCAGAG CGACCGGAAT
GTGTTCGCCT GGGAATGGCG TAAAGCATTA GAAGAAAATC ATAATGTGGA TTTCTGGCAA
GACACAGTCA GCGAAGTTAT AGTAAAAGAT AACCGTGTAA AAGGAGTCAA AACTAGCCTG
GGCGTTGAGT TCTCAGCGAA AGCAGTTGTC CTGACGAACG GGACGTTTCT GAATGGGCAG
ATGTTTATTG GCGAAAAAGT CTTTGGTGGA GGGCGAACGG CAGAACGTTC GGCTACTGGC
TTAACAGAAC AGTTGGTTCA TTTGGGTTTT GAAGCGGGTC GAATGAAGAC CGGAACGCCA
CCCCGTGTGG ATGGTCGAAG CCTTAATTAT GCATTGATGG AAGAACAGCT AGGGGATGAA
AACCCCGGCA AGTTTTCCTA CACAAACACT CCGGCTTTAA CGAAGCAGCG TAGTTGCTGG
ATCACCTATA CAAATCAGGC GGTACACGAT GAGCTTAAGA CAGGCTTCGA TAAGTCGCCT
ATGTTTACCG GCCGAATAAA AGGGTTGGGG CCTCGGTATT GCCCTTCGGT AGAGGATAAA
ATCAATCGGT TCGCGGATAA AGACAGGCAC CAGATTTTCG TGGAACCTGA AGGTTGGGAC
ACAGTAGAGG TGTACGTGAA TGGGTTTTCA ACATCGCTGC CAGAAACGGT GCAATACAAT
GCGCTTCGAA AAATTCAAGG TTTTGAAAAC GTGCGGATGT TCCGACCCGG CTATGCAGTT
GAATATGATT TCTTTCCGCC AACGCAGTTA AAGCCTACAC TCGAAACCCA GTTAGTCCAA
AACTTATTCT TTGCAGGCCA AATAAACGGA ACAACCGGAT ACGAAGAAGC AGCCTGCCAG
GGCTTAATGG CAGGTATAAA TGCGCATCGA AATAGTCATG AAGAAGCAGA ATTTACGATC
AAACGCTCCG AGGGATATAT TGGTGTTTTG ATCGATGATC TGATTACAAA AGGGACCGAA
GAGCCTTACC GGATGTTCAC ATCACGAGCT GAATATCGAA CCCTTTTAAG ACAAGATAAT
GCTGATTTAC GGCTCACCGA GAAAGGATAT GCTATTGGGT TAGCCTCGCA GGAACGTTAT
GAAACTATGT TAGCGAAACG GGAAGGCATA GCTAAACTGA CCGAAACAAT TCGTGCAACT
AAAGTAAAGC CTGAAGAGAT TAATACCTTT CTGGAATCTA AAGGGAGTGC ACCACTTCGG
GAAAAAGGAA GTCTGTATAC ACTGCTCAAG CGTCCAGAAA TTGATCAATC TGATGTAAAA
GGCATTCTTA GCAGCCTGCC CGACATGCCG AATGGGGTAG GGGAGGAGAC AATTGAGCAA
ACTGTTATTG AAATAAAATA CGAAGACTAC CTCAACCGGG AAAAGCAAAA CGCCGATAAA
CTCGATAAAT GGGAGAATCT TTCTATAAAT CCTACCTTCG ATTACGACCG ATTAAAAGCG
CTATCGTTCG AAGGTAAAGA AAAACTTAAA CGTCTACGGC CGTCTACAAT TGGCCAGGCT
TCCCGGATTA GTGGAGTCAG CCCGTCAGAC GTTTCTATTT TATTGGTCTA CATGGGCCGC
TAA
 
Protein sequence
MYSSYDVIVV GAGHAGCEAA NAAATMGSKV LLITMNMQTI AQMSCNPAMG GVAKGQIVRE 
VDALGGLSGI ISDKSMIQFR MLNRSKGPAM WSPRCQSDRN VFAWEWRKAL EENHNVDFWQ
DTVSEVIVKD NRVKGVKTSL GVEFSAKAVV LTNGTFLNGQ MFIGEKVFGG GRTAERSATG
LTEQLVHLGF EAGRMKTGTP PRVDGRSLNY ALMEEQLGDE NPGKFSYTNT PALTKQRSCW
ITYTNQAVHD ELKTGFDKSP MFTGRIKGLG PRYCPSVEDK INRFADKDRH QIFVEPEGWD
TVEVYVNGFS TSLPETVQYN ALRKIQGFEN VRMFRPGYAV EYDFFPPTQL KPTLETQLVQ
NLFFAGQING TTGYEEAACQ GLMAGINAHR NSHEEAEFTI KRSEGYIGVL IDDLITKGTE
EPYRMFTSRA EYRTLLRQDN ADLRLTEKGY AIGLASQERY ETMLAKREGI AKLTETIRAT
KVKPEEINTF LESKGSAPLR EKGSLYTLLK RPEIDQSDVK GILSSLPDMP NGVGEETIEQ
TVIEIKYEDY LNREKQNADK LDKWENLSIN PTFDYDRLKA LSFEGKEKLK RLRPSTIGQA
SRISGVSPSD VSILLVYMGR