Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5519 |
Symbol | |
ID | 8729287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6718194 |
End bp | 6720056 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | glucose inhibited division protein A |
Protein accession | YP_003390284 |
Protein GI | 284040354 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.262769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATTCTT CGTACGATGT CATTGTAGTA GGAGCTGGCC ATGCTGGATG TGAGGCAGCA AATGCTGCAG CCACCATGGG CTCAAAAGTT TTGCTGATTA CAATGAACAT GCAAACTATT GCACAAATGT CCTGCAACCC TGCTATGGGG GGTGTAGCTA AAGGACAGAT TGTTCGTGAA GTTGATGCGC TAGGCGGGCT ATCAGGGATA ATAAGCGATA AAAGCATGAT TCAATTTCGC ATGTTAAACC GCTCAAAAGG TCCTGCCATG TGGAGCCCGC GTTGTCAGAG CGACCGGAAT GTGTTCGCCT GGGAATGGCG TAAAGCATTA GAAGAAAATC ATAATGTGGA TTTCTGGCAA GACACAGTCA GCGAAGTTAT AGTAAAAGAT AACCGTGTAA AAGGAGTCAA AACTAGCCTG GGCGTTGAGT TCTCAGCGAA AGCAGTTGTC CTGACGAACG GGACGTTTCT GAATGGGCAG ATGTTTATTG GCGAAAAAGT CTTTGGTGGA GGGCGAACGG CAGAACGTTC GGCTACTGGC TTAACAGAAC AGTTGGTTCA TTTGGGTTTT GAAGCGGGTC GAATGAAGAC CGGAACGCCA CCCCGTGTGG ATGGTCGAAG CCTTAATTAT GCATTGATGG AAGAACAGCT AGGGGATGAA AACCCCGGCA AGTTTTCCTA CACAAACACT CCGGCTTTAA CGAAGCAGCG TAGTTGCTGG ATCACCTATA CAAATCAGGC GGTACACGAT GAGCTTAAGA CAGGCTTCGA TAAGTCGCCT ATGTTTACCG GCCGAATAAA AGGGTTGGGG CCTCGGTATT GCCCTTCGGT AGAGGATAAA ATCAATCGGT TCGCGGATAA AGACAGGCAC CAGATTTTCG TGGAACCTGA AGGTTGGGAC ACAGTAGAGG TGTACGTGAA TGGGTTTTCA ACATCGCTGC CAGAAACGGT GCAATACAAT GCGCTTCGAA AAATTCAAGG TTTTGAAAAC GTGCGGATGT TCCGACCCGG CTATGCAGTT GAATATGATT TCTTTCCGCC AACGCAGTTA AAGCCTACAC TCGAAACCCA GTTAGTCCAA AACTTATTCT TTGCAGGCCA AATAAACGGA ACAACCGGAT ACGAAGAAGC AGCCTGCCAG GGCTTAATGG CAGGTATAAA TGCGCATCGA AATAGTCATG AAGAAGCAGA ATTTACGATC AAACGCTCCG AGGGATATAT TGGTGTTTTG ATCGATGATC TGATTACAAA AGGGACCGAA GAGCCTTACC GGATGTTCAC ATCACGAGCT GAATATCGAA CCCTTTTAAG ACAAGATAAT GCTGATTTAC GGCTCACCGA GAAAGGATAT GCTATTGGGT TAGCCTCGCA GGAACGTTAT GAAACTATGT TAGCGAAACG GGAAGGCATA GCTAAACTGA CCGAAACAAT TCGTGCAACT AAAGTAAAGC CTGAAGAGAT TAATACCTTT CTGGAATCTA AAGGGAGTGC ACCACTTCGG GAAAAAGGAA GTCTGTATAC ACTGCTCAAG CGTCCAGAAA TTGATCAATC TGATGTAAAA GGCATTCTTA GCAGCCTGCC CGACATGCCG AATGGGGTAG GGGAGGAGAC AATTGAGCAA ACTGTTATTG AAATAAAATA CGAAGACTAC CTCAACCGGG AAAAGCAAAA CGCCGATAAA CTCGATAAAT GGGAGAATCT TTCTATAAAT CCTACCTTCG ATTACGACCG ATTAAAAGCG CTATCGTTCG AAGGTAAAGA AAAACTTAAA CGTCTACGGC CGTCTACAAT TGGCCAGGCT TCCCGGATTA GTGGAGTCAG CCCGTCAGAC GTTTCTATTT TATTGGTCTA CATGGGCCGC TAA
|
Protein sequence | MYSSYDVIVV GAGHAGCEAA NAAATMGSKV LLITMNMQTI AQMSCNPAMG GVAKGQIVRE VDALGGLSGI ISDKSMIQFR MLNRSKGPAM WSPRCQSDRN VFAWEWRKAL EENHNVDFWQ DTVSEVIVKD NRVKGVKTSL GVEFSAKAVV LTNGTFLNGQ MFIGEKVFGG GRTAERSATG LTEQLVHLGF EAGRMKTGTP PRVDGRSLNY ALMEEQLGDE NPGKFSYTNT PALTKQRSCW ITYTNQAVHD ELKTGFDKSP MFTGRIKGLG PRYCPSVEDK INRFADKDRH QIFVEPEGWD TVEVYVNGFS TSLPETVQYN ALRKIQGFEN VRMFRPGYAV EYDFFPPTQL KPTLETQLVQ NLFFAGQING TTGYEEAACQ GLMAGINAHR NSHEEAEFTI KRSEGYIGVL IDDLITKGTE EPYRMFTSRA EYRTLLRQDN ADLRLTEKGY AIGLASQERY ETMLAKREGI AKLTETIRAT KVKPEEINTF LESKGSAPLR EKGSLYTLLK RPEIDQSDVK GILSSLPDMP NGVGEETIEQ TVIEIKYEDY LNREKQNADK LDKWENLSIN PTFDYDRLKA LSFEGKEKLK RLRPSTIGQA SRISGVSPSD VSILLVYMGR
|
| |