Gene Slin_5508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5508 
Symbol 
ID8729276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6703580 
End bp6704686 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content51% 
IMG OID 
ProductDNA replication and repair protein RecF 
Protein accessionYP_003390273 
Protein GI284040343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTTG AAAAGCTAAG CCTGACCAAT TTTAAGAATT ATGAAGATGT TCGGTACACC 
TTCAGCAGGC AGGTAAACGT ACTCGTAGGC CCTAATGGAA GCGGAAAAAC CAACTTGCTC
GATGCGGTCT ATTTCCTGTC TCTGAGCAAA AGCGCCTTTC AGAGTCAGGA CGCAATGAGC
ATTCTGCACG ATACGGACTA CTTTATTATC GACGGGATTT TTGAAGAACA CGACGATCGT
ACCGTTCAGA TAACCATAAG TCTACAGAGG GGGCAGCGAA AAGTGCTCAT GGCCGACAAA
AAGCCGTACG AGCGGATAAG CGAGCACATT GGCCGGTTTC CGGTTGTGCT GGTTGCCCCC
AACGATACGG ACCTTGTTCG GGAGCACAGC GAAGATCGTC GGCACTTTTT CGATGGGGTG
CTCTCCCAGC TCGATCCGGA GTACCTGCGT AATTACCTTA TGTATCAGCA GATACTCAAG
CAGCGGAACA GCCTACTCAA GCTTTTTGCC GAGCGAAATC AGGTAGACAA TGACTTGCTG
GACACCTACG ACGAACCGCT GCTGGAACTT GGTCAGAAAA TCCACGACCG CAGGCGTCAG
TTCATCGACG AGTTTTTGCC CGGCTTTCGG TCGCACTACG CTTACCTGAG CGACGACCGC
GAAGAGGTAA CCATCCAGTA CGAATCGGAA GTGAGTAACC CCGGTTTTGC CGACGAGTTC
AGGCATTTCC GTCGGCGTGA TACGGTGCTC CAGCGAACAA CAATGGGTAT TCATAAGGAT
GATTACTCGT TTATAATTGA GTCGGGAAAC GGCCAGCCGC CTGTGCCCCT TAAGAAGTTC
GGGTCGCAGG GGCAACAGAA AACGTTCGTG ATTGCGTTGA AACTGGCTCA GTTTGCCCAG
TTACAAGCCG AAAAAGACGT GAAGCCTATT CTGTTGCTGG ACGACATTTT CGATAAGCTG
GATGACCGGC GAATTGGGAA GCTGATCCAG CAAATGGATG AGGGCGTATT TGGCCAGCTC
TTCATCACCG ATGCCCGCCC GGAGCGTACC CGGCAATTGC TTACCAACGT CAAAGCGGAT
ATAAAGTTTT TTGAAATAGG TGCTTAA
 
Protein sequence
MHLEKLSLTN FKNYEDVRYT FSRQVNVLVG PNGSGKTNLL DAVYFLSLSK SAFQSQDAMS 
ILHDTDYFII DGIFEEHDDR TVQITISLQR GQRKVLMADK KPYERISEHI GRFPVVLVAP
NDTDLVREHS EDRRHFFDGV LSQLDPEYLR NYLMYQQILK QRNSLLKLFA ERNQVDNDLL
DTYDEPLLEL GQKIHDRRRQ FIDEFLPGFR SHYAYLSDDR EEVTIQYESE VSNPGFADEF
RHFRRRDTVL QRTTMGIHKD DYSFIIESGN GQPPVPLKKF GSQGQQKTFV IALKLAQFAQ
LQAEKDVKPI LLLDDIFDKL DDRRIGKLIQ QMDEGVFGQL FITDARPERT RQLLTNVKAD
IKFFEIGA