| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5506 |
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| Symbol | |
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| ID | 8729274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6701334 |
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| End bp | 6702689 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003390271 |
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| Protein GI | 284040341 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.307266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAATGA TCTGGCTGCT CGCCTTGCTG AGTAGTACAG GGTCGTTACT TGCACAAAAC
CGACAGGAGT TTTCGCTCAA CGAAGCAATC AAGTTTGCGG TTGAGAACAA CATCAATGTG
AAGAATTCGG GGCTGGACGC ACTAAGTTCA GAAGCGCGGA TTCAGGAGAT TAGAGGGGTT
GCCTTACCAC AGGTAAGTGT TGCCGGATCA ATATCAGATA ATCTGATTAT TCAGCGAGCT
TTCCTTCCTG CCAAGTTTTT TAACCCGAAT GCGGCCGACA GCGATCCGCC GATTGCGGTC
CAGTTTGGCG TGGCTTATTC AGGTAATGCG ACGGCTACGC TTAACCAACT ATTGTTCGAT
GCATCGTATC GACTGGGACT GAAAGCGGCT GAGACCTACC GACAACTGGC GCAGAAAAAC
ATAATGGCTT CGAAAATCGG CGTGGCCGAG CAGGTCGCCA AGGCGTATTA TGGTGTACTG
GTGAACGAAC AACAGATTAA GTTGCTCGAC CTGAATATTG CCCGCGTTGA TACACTGTAT
CGGAATACAC AAGCCCTCAA TAAGCAGGGA TTTGCCGAAA AAATAGACGT GAGCCGTCTT
GAAGTTCAGG TGAATAACCT AAAAGCGGAA CGCCAGAATG TGAAGAACCT GGTTGAGTTG
AGTTATTACC TGCTCAAGTT TCAAATGGGT TTGGGCATTA ATGATAACAT AACGCTGACG
GAGCAAATTC AGGACATTGA TCTGGATGCT ATGGAACGCG CTACGGTTCA GTCGTCGGCT
GAATTTGATT ACAACCAGCG CATCGAATTT TCGACCTTAC AATCGCAGAT TCAACTGGCC
GATCTGGATG TTCAGAGTGT GGCCAAGCTG TATTATCCCA GATTAACTGC CTTTGCCAAT
TATGGCTACA ACACAGGACG AAATAGGTTC GGAGAGGTTG TTGGTTCGCC CTGGTTCAAC
TCATCTGTAA TAGGTCTTAA CCTGTCGGTA CCCGTTTTTG ATGGTTTTCA GAAGAAATAC
CAGGCGCAAC AAAAGCGATT TACGCTGCAA AAAGCGCAGA ACAGCGGCCA ACTGCTGAAA
AACTCCATCG ATCTGCAAAT CCGTCAGGCA ACCATAACGC TGGGGAACAG CCTGCAAACG
CTGCGAACGC AGAAGCGTAA CGTTGAACTC GCTCAGGAAG TAGCGCGCGT AACTAAAATC
AAGTACCAGG AAGGCGTTGG ATCAAACATT GAAGTGCTGG ATGCCGAAAA CTCATTCCGG
CAGGCGCAAA CGAATTACTT TGCTTCGCTC TATAACTTCC TGCAAACCAA GGTAGATGCC
GACAAAGCAA ATGGTAAGCT TTACATTGGC AATTAA
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| Protein sequence | MVMIWLLALL SSTGSLLAQN RQEFSLNEAI KFAVENNINV KNSGLDALSS EARIQEIRGV
ALPQVSVAGS ISDNLIIQRA FLPAKFFNPN AADSDPPIAV QFGVAYSGNA TATLNQLLFD
ASYRLGLKAA ETYRQLAQKN IMASKIGVAE QVAKAYYGVL VNEQQIKLLD LNIARVDTLY
RNTQALNKQG FAEKIDVSRL EVQVNNLKAE RQNVKNLVEL SYYLLKFQMG LGINDNITLT
EQIQDIDLDA MERATVQSSA EFDYNQRIEF STLQSQIQLA DLDVQSVAKL YYPRLTAFAN
YGYNTGRNRF GEVVGSPWFN SSVIGLNLSV PVFDGFQKKY QAQQKRFTLQ KAQNSGQLLK
NSIDLQIRQA TITLGNSLQT LRTQKRNVEL AQEVARVTKI KYQEGVGSNI EVLDAENSFR
QAQTNYFASL YNFLQTKVDA DKANGKLYIG N
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