Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5500 |
Symbol | |
ID | 8729268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6691944 |
End bp | 6692822 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | dienelactone hydrolase |
Protein accession | YP_003390265 |
Protein GI | 284040335 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000914876 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG TATTCATTAC CGGACTTTCG TTCTTTATGT CGCTGCTGTC ATTATTGAAC ATCAAGCCAG CGCAACCTCA GGAAACGGCG ATACCACTTT GCCACGCCCC TGCTCAAGAC GGCGAAGGCA ACGATATGTC GGCGATGGCC GCTGATCCGG CTTTCCAGCG TCTACACGAA GCGCCCCTGC CTTTCACCTA CGTCGGTGCG GGCGAAATGA TCAAGTTCTC GACTCCCGAC GGTCAATCGG CAAACGGGTT TTTGCTGAAA TCGAAAAAGA ATTCCAACAA ATGGCTGCTG GTGTATCAGG AATGGTGGGG CCTGAACGAC AACATCAAGC AGCAGGCCGA AACGTTTTAC AACGACCTGA AGGACGTGAA CGTACTGGCC GTTGATATGT ACGATGGCAA AGTGGCAACC GAGCCATCGG AAGCAGGTAA ACTCATGCAG AGCGCCAATA AAGACCGGCT GGCCAGCATC ATGAAAGGCG CCATTGAATA CGCTGGTCCT AAAGCTGAGT TTGCCAGCGT CGGCTGGTGT TTCGGCGGCA TGCTGTCGTT ACAGTCGGCT ATGCTGGAAG GCAAAAAAGC CAAAGGTTGC GTGATGTATT ACGGTCGGCC AGAGCAGGAC GTGGAGAAGC TGAAAACGCT CGACACCGAC GTACTGGGCA TTTTCGGTAG CCAGGATAAA GGCATCACGC CTGAGTCGGT CAAAACGTTT GAAGAAAACA TGGCGAAAGC CGGTGAAAAA GTAACGGTAA AAATGTACGA TGCGGGCCAC GGCTTTGCCA ACCCAAGCAA CCCGGTTTAT AACAAAGAGG CCGCAGCCGA TGCCTATAAG CTGGCGCTGA ATTATCTGAA AGATAAACTG AAAGCATAA
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Protein sequence | MKIVFITGLS FFMSLLSLLN IKPAQPQETA IPLCHAPAQD GEGNDMSAMA ADPAFQRLHE APLPFTYVGA GEMIKFSTPD GQSANGFLLK SKKNSNKWLL VYQEWWGLND NIKQQAETFY NDLKDVNVLA VDMYDGKVAT EPSEAGKLMQ SANKDRLASI MKGAIEYAGP KAEFASVGWC FGGMLSLQSA MLEGKKAKGC VMYYGRPEQD VEKLKTLDTD VLGIFGSQDK GITPESVKTF EENMAKAGEK VTVKMYDAGH GFANPSNPVY NKEAAADAYK LALNYLKDKL KA
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