Gene Slin_5500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5500 
Symbol 
ID8729268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6691944 
End bp6692822 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content52% 
IMG OID 
Productdienelactone hydrolase 
Protein accessionYP_003390265 
Protein GI284040335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000914876 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG TATTCATTAC CGGACTTTCG TTCTTTATGT CGCTGCTGTC ATTATTGAAC 
ATCAAGCCAG CGCAACCTCA GGAAACGGCG ATACCACTTT GCCACGCCCC TGCTCAAGAC
GGCGAAGGCA ACGATATGTC GGCGATGGCC GCTGATCCGG CTTTCCAGCG TCTACACGAA
GCGCCCCTGC CTTTCACCTA CGTCGGTGCG GGCGAAATGA TCAAGTTCTC GACTCCCGAC
GGTCAATCGG CAAACGGGTT TTTGCTGAAA TCGAAAAAGA ATTCCAACAA ATGGCTGCTG
GTGTATCAGG AATGGTGGGG CCTGAACGAC AACATCAAGC AGCAGGCCGA AACGTTTTAC
AACGACCTGA AGGACGTGAA CGTACTGGCC GTTGATATGT ACGATGGCAA AGTGGCAACC
GAGCCATCGG AAGCAGGTAA ACTCATGCAG AGCGCCAATA AAGACCGGCT GGCCAGCATC
ATGAAAGGCG CCATTGAATA CGCTGGTCCT AAAGCTGAGT TTGCCAGCGT CGGCTGGTGT
TTCGGCGGCA TGCTGTCGTT ACAGTCGGCT ATGCTGGAAG GCAAAAAAGC CAAAGGTTGC
GTGATGTATT ACGGTCGGCC AGAGCAGGAC GTGGAGAAGC TGAAAACGCT CGACACCGAC
GTACTGGGCA TTTTCGGTAG CCAGGATAAA GGCATCACGC CTGAGTCGGT CAAAACGTTT
GAAGAAAACA TGGCGAAAGC CGGTGAAAAA GTAACGGTAA AAATGTACGA TGCGGGCCAC
GGCTTTGCCA ACCCAAGCAA CCCGGTTTAT AACAAAGAGG CCGCAGCCGA TGCCTATAAG
CTGGCGCTGA ATTATCTGAA AGATAAACTG AAAGCATAA
 
Protein sequence
MKIVFITGLS FFMSLLSLLN IKPAQPQETA IPLCHAPAQD GEGNDMSAMA ADPAFQRLHE 
APLPFTYVGA GEMIKFSTPD GQSANGFLLK SKKNSNKWLL VYQEWWGLND NIKQQAETFY
NDLKDVNVLA VDMYDGKVAT EPSEAGKLMQ SANKDRLASI MKGAIEYAGP KAEFASVGWC
FGGMLSLQSA MLEGKKAKGC VMYYGRPEQD VEKLKTLDTD VLGIFGSQDK GITPESVKTF
EENMAKAGEK VTVKMYDAGH GFANPSNPVY NKEAAADAYK LALNYLKDKL KA