| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5457 |
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| Symbol | |
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| ID | 8729224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6638049 |
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| End bp | 6641042 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_003390222 |
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| Protein GI | 284040292 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.96899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGA CCACGGAAAC CGAACGCTTT AGTTCCGTTG ACCAGCTCGA CCCCAAACAG
TTCATTATCA TTAAAGGGGC GAAAGTACAT AATCTTAAAG GAATTGATGT TGCCATTCCG
CGCAACAAAT TAGTTGTCTT AACGGGGCTG TCTGGTTCGG GCAAATCGTC GCTGGCTTTC
GATACGCTCT TTGCCGAGGG GCAGCGGATG TACGTCGAAA GCCTGAGCAG CTACGCCCGG
CAGTTTCTGG GGCGGATGGA AAAGCCCGAG GTGGAGTACA TCAAAGGGGT GTCGCCCGCT
ATTGCCATCG AGCAAAAAGT GTCGACCCGA AATCCGCGCT CAACCGTAGG GACCTCAACC
GAAATCTACG ACTACCTCAA GCTGCTTTTT GCCCGGTCCG GGGTTACGTA TTCGCCTATT
TCGGGCCATG AGGTGAAGAA AGATACCGTT ACGGATGTCG TCAACTTCAT GTATGGGTAT
GAGGCCGGTC CGGGTGGCGC TCCACAGCGG GTCATGATCA TGGCTCCCCT GCGCATCCGC
GAAGGCCGGA CGCTGGCCTA TGAACTTAAT ATCCTGCTGC AGAAAGGCTA CACCCGTATT
GTGGCGGATG GCGGTCAGGA TGATGCCGCA TCGTCGGCTC GGCAGGTGCT GCAAATCGAA
GATATTTTAG AGAATGAAGG CAACTATGCC TCCCTCTTTG CGGATCACGC TTCTCTTGAG
ATTCTAGTTG ACCGGGGAAC GGTGCTGTAC GATGCCAACG GTAACCCGGA CGAAGACAAC
CAATACCGCT TTTCGGACTC CGTACAAACG GCGTTCAGCG AAGGGGAAGG TACCTGCCGG
GTGGATGTGG TGGGTAAAGA GTCGCGGGTT TTCTCCGATA AATTTGAACT CGACGGGATT
GCCTTCGAAG AGCCAAGTGT AAACCTGTTC ACGTTCAACA ATCCCTACGG AGCCTGCCGC
CGGTGCGACG GCTTTGGAAA GGTGCTGGGC ATCGACCCGG ATTTAGTCGT TCCCGATAAA
AACCTGTCGG TCTTTGAAGG AGCCATTGCG CCCTGGCGGA GCGAGAAAAT GAGCGAGGAG
TTTTTGAAAC CGCTACTAAA GAACGGCATC CGATTCGATT TCCCGATTCA TCGCCCATAC
AAAGACCTCA CACCCGCCGA GCAGGAACTG CTCTGGACCG GCAACAAGTA TTTCGATGGA
ATCAACGCGT TCTTTGCCTT CGTGGAAAGT CAGACTTTCA AGGTGCAGTA CCGCGTCATG
CTGTCGCGCT ACCGGGGAAA AACGACTTGT CCCGAGTGCC GGGGCTCGCG CTTGCGGAAA
GATGCGGGCT ATGTAAAAGT AGGCGGGAAA TCCATTACCG ACCTTGTGCT CATGCCCCTC
ACGCACGTCA CTGCGTTCTT CCAAGACCTG GAACTGCCCG CCCATCAGCA ACAGGTGGCC
AACCGAATTT TGATCGAAAT TCGTAATCGG CTCGACTTTA TGGAGCGTGT TGGACTTGGT
TACCTGACCC TCAACCGCCT GACCAATACG CTGTCGGGTG GCGAATATCA GCGCATTAAG
CTGGCCACCT CCCTTGGCTC GGCGCTGGTG GGATCGATGT ATATTCTGGA TGAACCCAGT
ATTGGCTTGC ATCCCCGCGA TACCCAGCGG CTGGTGAGCG TACTGGAAGC CCTCCGCGAC
ATGGGCAACA CGGTTATTGT GGTCGAACAC GAAGAAGAGG TGATGCGTGC CGCCGACCAG
CTCATCGACA TCGGCCCCGA CGCCGGTTCG CTGGGCGGCC ATCTGATGTT TCAGGGCACA
TGGGGGGATA TTAAGGAGCT AGGAGCGAGG AGCGAGGAGC GAGGAGTTGC TGACGCGTCT
GGTTCGCTGC ATGCGTCAGC AACTCCTCAC TCCTCACTCC TCGCTCCTCA CTCCTCCTCT
TCACACACCA TCGACTTTCT CACGGGCCGT GAAACCGTTC CGGTGCCGAC GTTCCGGCGG
AAGGCGACCA ACTTTATTGA ACTGAAAGGC GCTCGGGAGA ATAACCTTAA GGATGTAGAC
GTGCGGTTTC CGCTCAATAC GCTTACCGTT GTAACGGGCG TGTCGGGTTC GGGGAAGAGT
ACGCTGATCC GGAAAGTGCT GTACCCCGCC CTCATGCGGC AACGGGGCGA AGGCACCGAA
GAGGCTGGTA GATTCGATAG TCTGAGCGGT TCGCTCGAGC GGATCTCGTC GGTTGAAATG
ATTGACCAGA ACCCGATTGG TAAATCGAGC CGGTCGAATC CGGTTACCTA TATTAAAGCA
TACGATTACC TCCGGCAGGT AATGGCCGAC CAACCCGTAT CAAAATCGCG CGGGTACAAG
CCCAGTCATT TCTCGTTCAA CGTGGATGGC GGGCGTTGTG AGGTATGCCA GGGTGAGGGT
GAAGTGAAAA TCGAGATGCA GTTCATGGCC GACATTTACC TCAAGTGCGA AGGCTGTGGC
GGCAAACGCT TCAAGCAGGA AGTGCTGGAG GTAACCCTGC ACGATAAAAA CATCTCGGAT
ATACTCGATA TGACGGTCGA CGAAGCCATT GTCTTCTTCC GCAAGGTAGA TAACAAAATG
GCCGATAAAT TGCAGCCCCT TCAGGATGTA GGATTAGGCT ATATTGGTCT GGGGCAGTCG
GCTAATACGC TGTCGGGTGG CGAAGCCCAA CGGGTAAAAC TGGCATCGTT CCTCGGCAAA
GGCAATCCCA ACAAAGGCAG CATGCTGTTC ATCTTCGACG AACCCACAAC GGGGCTGCAC
TTCCACGATA TTCGTAAGTT GCTGGCGGCC ATCAACGCGC TGGTCGATCA GGGCGACTCG
GTAATTATCA TCGAGCACAA CATGGAAGTC ATCAAAAACG CCGACCATAT TATCGACATC
GGTCCCGAAG GGGGCGAAAC CGGTGGTTAT ATCATGTTCA CCGGCACCCC CGAAGAGATG
GTAAAGCTGG ACGATGGTAA TCACACCGCC CGTTACCTCA AGGGGAAAGT ATAG
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| Protein sequence | MTQTTETERF SSVDQLDPKQ FIIIKGAKVH NLKGIDVAIP RNKLVVLTGL SGSGKSSLAF
DTLFAEGQRM YVESLSSYAR QFLGRMEKPE VEYIKGVSPA IAIEQKVSTR NPRSTVGTST
EIYDYLKLLF ARSGVTYSPI SGHEVKKDTV TDVVNFMYGY EAGPGGAPQR VMIMAPLRIR
EGRTLAYELN ILLQKGYTRI VADGGQDDAA SSARQVLQIE DILENEGNYA SLFADHASLE
ILVDRGTVLY DANGNPDEDN QYRFSDSVQT AFSEGEGTCR VDVVGKESRV FSDKFELDGI
AFEEPSVNLF TFNNPYGACR RCDGFGKVLG IDPDLVVPDK NLSVFEGAIA PWRSEKMSEE
FLKPLLKNGI RFDFPIHRPY KDLTPAEQEL LWTGNKYFDG INAFFAFVES QTFKVQYRVM
LSRYRGKTTC PECRGSRLRK DAGYVKVGGK SITDLVLMPL THVTAFFQDL ELPAHQQQVA
NRILIEIRNR LDFMERVGLG YLTLNRLTNT LSGGEYQRIK LATSLGSALV GSMYILDEPS
IGLHPRDTQR LVSVLEALRD MGNTVIVVEH EEEVMRAADQ LIDIGPDAGS LGGHLMFQGT
WGDIKELGAR SEERGVADAS GSLHASATPH SSLLAPHSSS SHTIDFLTGR ETVPVPTFRR
KATNFIELKG ARENNLKDVD VRFPLNTLTV VTGVSGSGKS TLIRKVLYPA LMRQRGEGTE
EAGRFDSLSG SLERISSVEM IDQNPIGKSS RSNPVTYIKA YDYLRQVMAD QPVSKSRGYK
PSHFSFNVDG GRCEVCQGEG EVKIEMQFMA DIYLKCEGCG GKRFKQEVLE VTLHDKNISD
ILDMTVDEAI VFFRKVDNKM ADKLQPLQDV GLGYIGLGQS ANTLSGGEAQ RVKLASFLGK
GNPNKGSMLF IFDEPTTGLH FHDIRKLLAA INALVDQGDS VIIIEHNMEV IKNADHIIDI
GPEGGETGGY IMFTGTPEEM VKLDDGNHTA RYLKGKV
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