| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5409 |
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| Symbol | |
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| ID | 8729176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6579769 |
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| End bp | 6580440 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003390175 |
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| Protein GI | 284040245 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00220575 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATAC GAATTCTTAT TGCCGATGAC CATTCTGTAG TGAGAAAAGG CATTCGGATG
CTGCTGGAAG ATGAAACCGA TATTCAAATC GTAGGCGAAG CTTCCGACGG CGACGAAGCC
ATCGACCTGC TGGCCAGTAT CGGCACTGAT GTTTTACTGT TGGATATAAC CATGCCCCGA
ATGTCAGGCA TCGAAGCCCT GAAAGTTATT TCAAAGAAAT ACCCGGCAGT TAGAACGCTC
ATGTTCAGCA TGCATAGCAA CCCGGACTAC ATCGTAAAAG CGGTACAGCA CGGGGCGGCT
GGTTATCTGC TGAAAGATAC GGGACTGGAA GAAATGCTAC GAGCTGTACG TACGGTGGTT
GACGGTGATT TATACTATCC GCCGAATGCG TCTTCGGTCA TAATCCGGAG CCTTGTTCTG
CCCAATGCCA ACCTGACGAA GGAACCCGCC AAGGCAGGGG GGAGCGTATC AAAATCCATC
TGGAATCGAA TCACATCCCG CGAAGGACAG GTGCTGACCT GCCTGATTGA CGGCATGAGC
AGTCCTGAGA TCGCTGAAAA GTTTGGCATC AGCCCCAACA CAGTAGCTAA TCAACGAGCC
AGCATCATCC GCAAAGCGGG CGTTAAAAAC ACGGCTGATT TGATACGGCT GGCGCTGGAA
GAGAAAAGAT AG
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| Protein sequence | MPIRILIADD HSVVRKGIRM LLEDETDIQI VGEASDGDEA IDLLASIGTD VLLLDITMPR
MSGIEALKVI SKKYPAVRTL MFSMHSNPDY IVKAVQHGAA GYLLKDTGLE EMLRAVRTVV
DGDLYYPPNA SSVIIRSLVL PNANLTKEPA KAGGSVSKSI WNRITSREGQ VLTCLIDGMS
SPEIAEKFGI SPNTVANQRA SIIRKAGVKN TADLIRLALE EKR
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