Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5396 |
Symbol | |
ID | 8729163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6560625 |
End bp | 6561197 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | protein of unknown function DUF820 |
Protein accession | YP_003390162 |
Protein GI | 284040232 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGTA CACTGCTTGA CGCTACAGAA GAGGAAGCCG TTGTTGGTAT TCCCATGTCG AAGGAGCAGT TCCTGAACTG GAACCCCGAC GATGGCTTTC TGTATGAATT TGAGAATGGA TTGGCTATAC CCACCGATGG AATGAAGAAT GTTGAGCGTC CTATTGTTCA GAAGATACTG CGAAAGTTTA CACAAACGGT TGCTTATCAG CAAATGGGAG AAATTCTTCC AGAAACTAAA TGTTGGTTAA CGGATGACCA GATGCGTATA CCCGACGCTG CTTTTTTTAC AGCATCACAA ATTCGAGATT CCGGTGCCGA TCAGCACCCC ATCCCATTCT TCGTAATTGA ACTAATCTCG CCCAGCGATA CGGTTAAGCG GGTAGAGTCG AAAATCATCG AGTATTTTAA CGCTGGCGTG CAGGTCGTTT GGCACATCCA CCCCGAACTG CGTATGGTGC GGGTTTTTTC CTCGCCCCGG CATAACGTCA CTTGTTTTGA GAATGACACC TTCAATGCTG CTCCGGTAGT TCCCGACCTT CAATTAACGG TCGAGGAGTT ATTCACGGTT TAA
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Protein sequence | MESTLLDATE EEAVVGIPMS KEQFLNWNPD DGFLYEFENG LAIPTDGMKN VERPIVQKIL RKFTQTVAYQ QMGEILPETK CWLTDDQMRI PDAAFFTASQ IRDSGADQHP IPFFVIELIS PSDTVKRVES KIIEYFNAGV QVVWHIHPEL RMVRVFSSPR HNVTCFENDT FNAAPVVPDL QLTVEELFTV
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