Gene Slin_5396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5396 
Symbol 
ID8729163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6560625 
End bp6561197 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content47% 
IMG OID 
Productprotein of unknown function DUF820 
Protein accessionYP_003390162 
Protein GI284040232 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGTA CACTGCTTGA CGCTACAGAA GAGGAAGCCG TTGTTGGTAT TCCCATGTCG 
AAGGAGCAGT TCCTGAACTG GAACCCCGAC GATGGCTTTC TGTATGAATT TGAGAATGGA
TTGGCTATAC CCACCGATGG AATGAAGAAT GTTGAGCGTC CTATTGTTCA GAAGATACTG
CGAAAGTTTA CACAAACGGT TGCTTATCAG CAAATGGGAG AAATTCTTCC AGAAACTAAA
TGTTGGTTAA CGGATGACCA GATGCGTATA CCCGACGCTG CTTTTTTTAC AGCATCACAA
ATTCGAGATT CCGGTGCCGA TCAGCACCCC ATCCCATTCT TCGTAATTGA ACTAATCTCG
CCCAGCGATA CGGTTAAGCG GGTAGAGTCG AAAATCATCG AGTATTTTAA CGCTGGCGTG
CAGGTCGTTT GGCACATCCA CCCCGAACTG CGTATGGTGC GGGTTTTTTC CTCGCCCCGG
CATAACGTCA CTTGTTTTGA GAATGACACC TTCAATGCTG CTCCGGTAGT TCCCGACCTT
CAATTAACGG TCGAGGAGTT ATTCACGGTT TAA
 
Protein sequence
MESTLLDATE EEAVVGIPMS KEQFLNWNPD DGFLYEFENG LAIPTDGMKN VERPIVQKIL 
RKFTQTVAYQ QMGEILPETK CWLTDDQMRI PDAAFFTASQ IRDSGADQHP IPFFVIELIS
PSDTVKRVES KIIEYFNAGV QVVWHIHPEL RMVRVFSSPR HNVTCFENDT FNAAPVVPDL
QLTVEELFTV