Gene Slin_5359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5359 
Symbol 
ID8729124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6519609 
End bp6520922 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content53% 
IMG OID 
ProductMiaB-like tRNA modifying enzyme YliG 
Protein accessionYP_003390126 
Protein GI284040196 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAACCA AAGGAATACG TACCAATAAA ATCAATATCG TCACGCTTGG TTGCTCGAAG 
AACCTGGTGG ACTCGGAGGT GCTGTTTACG CAACTCAAGG GCAATGGCAT GAACGTGACG
CACGAGTCGA AGAAAGATGA TGCCAACATT GTCGTTATCA ATACGTGCGG CTTCATCGAC
AACGCCAAGG AAGAATCCAT CAACACCATT CTGCGGTATG TTGATGCCAA AGAAGCCGGT
ATTGTAGATA AGGTCTACGT AACGGGTTGC CTTTCTCACC GCTATAAAGA CGAACTCGAA
GTGGAAATGC CGACCGTCGA TGCCTGGTTT GGCACCAACG AACTTCCCCG GATGCTTAAA
ACGCTTCGGG CCGATTACAA GCACGAACTC GTGGGCGAGC GTCTGCTTAC AACTCCGGCC
CATTTCGCCT ACCTCAAAAT CGCTGAAGGT TGCGACCGAC CCTGCTCGTT CTGCGCCATT
CCGCTCATGC GTGGTGGTCA CGTATCGCGG CCCATCGACG AGCTGTTGAC CGAAGCCCGG
TCGCTGGCCC GGCGCGGCAC CAAAGAACTA ATTCTAATTG CCCAGGACCT GACCTATTAC
GGTCTCGACC TTTATAAAAA ACGCAACCTT GCCGACCTCA TCGACCAATT GGCCGACGTG
GAAGGCATCG ACTGGATTCG CTTGCAATAC GCCTATCCAT CGGGCTTCCC AATGGATATT
CTGGATGTAA TGCGCAACCG CCCCAACGTT TGCAACTACC TCGACATGCC CCTGCAAACC
GGTTCTACCG AGTTGCTGAA ACTCATGCGC CGGGGTATTA CGCGGGAGAA AACCGAAAGT
TTGATCGAAA CCATCCGGGA AAAAGTACCG GACATCACCC TCCGCACCAC CCTGATCGTG
GGCCACCCCG GCGAAACGGA AGCCATGTTC CAGGAAACAT ACGATTTCGT GGAGCGCATG
CGCTTTGACC GCCTGGGCGT GTTTACCTAT TCGCACGAAG ACGATACGCA CTCGTTCACG
ATGCCCGACG ATATTCCGGC CGACATTAAG CAGGAACGCG CCGACGAACT GATGGACTTG
CAGCAGGGCA TTTCGCAGGA GCTGAACCAG CAGAAAGTGG GCAAAACCTA CAAAGTGCTG
TTCGACCGAA AAGAAGGTGG TTATTTCATT GGCCGCACCG AAGCCGACTC GCCCGAAGTG
GATAATGAAG TGCTGGTACC CGCTACCCAA TACGTTCGAC TGGGCGACTT CGCCAACGTA
CGCATCGACC GGGCTGAGGA GTTTGATTTG TACGGCGAAG TTGTTAGTGT GTAA
 
Protein sequence
MKTKGIRTNK INIVTLGCSK NLVDSEVLFT QLKGNGMNVT HESKKDDANI VVINTCGFID 
NAKEESINTI LRYVDAKEAG IVDKVYVTGC LSHRYKDELE VEMPTVDAWF GTNELPRMLK
TLRADYKHEL VGERLLTTPA HFAYLKIAEG CDRPCSFCAI PLMRGGHVSR PIDELLTEAR
SLARRGTKEL ILIAQDLTYY GLDLYKKRNL ADLIDQLADV EGIDWIRLQY AYPSGFPMDI
LDVMRNRPNV CNYLDMPLQT GSTELLKLMR RGITREKTES LIETIREKVP DITLRTTLIV
GHPGETEAMF QETYDFVERM RFDRLGVFTY SHEDDTHSFT MPDDIPADIK QERADELMDL
QQGISQELNQ QKVGKTYKVL FDRKEGGYFI GRTEADSPEV DNEVLVPATQ YVRLGDFANV
RIDRAEEFDL YGEVVSV