Gene Slin_5245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5245 
Symbol 
ID8729011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6399049 
End bp6400392 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content53% 
IMG OID 
Productacetyl-CoA carboxylase, biotin carboxylase 
Protein accessionYP_003390015 
Protein GI284040085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGA AAATATTAAT CGCCAATCGG GGAGAGATCG CGTTGCGGAT TATCCGGACG 
TGCCGTGAAA TGGGTATCAA GACGGTGGCC GTCTACTCGA CCGCCGACCG CGATAGCCTG
CACGTACGTT TCGCCGATGA GGCCGTTTGC ATTGGCCCGC CCATCAGCAA ACAATCATAT
CTGAGTATTC CCAGTATCAT CTCGGCGGCC GAGGTAACCG GTGCCGATGC CATTCACCCC
GGCTATGGGT TCCTCTCCGA AAACGCTGAA TTTTCTCAGA TTTGCGCCGA CTACGGTATC
AAATTTATTG GTGCTACTGC CGAGCAGATT AACGGTATGG GCGATAAGTC GACGGCCAAA
GCCACGATGA AAGCCGCTGG CGTTCCGGTT ATTCCCGGTT CTGATGGTTT GCTCGAATCG
GTAGAACAGG GTAAGCGGTT ATCCACCGAA ATGGGTTATC CGGTTATCGT GAAAGCTACC
GCCGGTGGTG GTGGACGTGG TATGCGGATC GTTCGGTCGG AAGACGAATT CGAAAAAGCC
TGGAACGACG CTCGTACCGA AGCCGGTGCG GCTTTCGGTA ACGATGGTTT GTATCTGGAG
AAATTCGTTG AAGAACCCCG CCACATCGAG ATTCAGATCG TTGGCGACCA GTACGGTAAA
GTGTGCCACC TGTCGGAGCG GGATTGTTCC ATTCAGCGTC GGCATCAGAA GTTGATTGAA
GAGACACCCT CACCGGTTGT GTCGCCCGAA CTTCGGGAGA AGATGGGCGC TGCGGCTATC
AAAGGAGCGC AGGCCATCGG CTACGAAGGA GCCGGAACGG TTGAATTTCT GGTCGACAAG
CATGGGGATT TCTACTTCAT GGAGATGAAT ACCCGGATTC AGGTGGAGCA CCCCATTACC
GAGGAGGTAA CGGATTTTGA CCTGATCAAA GAACAAATTA AAGTAGCCGC TGGGGCTGAA
ATTTCGGGTC GCAACTACAC CCCGAAATTA TACGCGATGG AGTGCCGGAT CAATGCTGAG
GACCCAGCCA ACGGGTTCCG GCCATCGCCG GGCAAAATCA CGAACCTGCA TTTCCCCGGC
GGGCATGGTG TTCGGATCGA TAGCCACGTG TACAGCGGCT ATACTATTCC TCCAAACTAC
GACTCGATGA TTGCCAAGCT GATCGTGTCG GGTCAATCGC GGGAAGAGGT CATTACGCGG
ATGAAGCGGG CGTTGCAGGA ATTCGTTATC GAAGGCATTA AAACCACGAT ACCGTTCCAC
ATCCGATTGA TGGACGATCC TAAATTTCAG TCTGGTCAGT TTACAACCGC CTTCCTGGAA
ACGTTCGATT TCAGTAAGAT ATAA
 
Protein sequence
MFKKILIANR GEIALRIIRT CREMGIKTVA VYSTADRDSL HVRFADEAVC IGPPISKQSY 
LSIPSIISAA EVTGADAIHP GYGFLSENAE FSQICADYGI KFIGATAEQI NGMGDKSTAK
ATMKAAGVPV IPGSDGLLES VEQGKRLSTE MGYPVIVKAT AGGGGRGMRI VRSEDEFEKA
WNDARTEAGA AFGNDGLYLE KFVEEPRHIE IQIVGDQYGK VCHLSERDCS IQRRHQKLIE
ETPSPVVSPE LREKMGAAAI KGAQAIGYEG AGTVEFLVDK HGDFYFMEMN TRIQVEHPIT
EEVTDFDLIK EQIKVAAGAE ISGRNYTPKL YAMECRINAE DPANGFRPSP GKITNLHFPG
GHGVRIDSHV YSGYTIPPNY DSMIAKLIVS GQSREEVITR MKRALQEFVI EGIKTTIPFH
IRLMDDPKFQ SGQFTTAFLE TFDFSKI