Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5209 |
Symbol | |
ID | 8728975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6358758 |
End bp | 6359489 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003389980 |
Protein GI | 284040050 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.779057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCCC AACCGCATAT TCTGGTTATC GTACCCTGTT ACAATGAGCA GGGCGCCATT GCCAGTGTGG TGAATGAACT GATTGCCGTA CGGGATCGGG AAAGGTATGC GCTGGATATT CTGGTTGTTA ATGATTGCTC TACCGATAAT TCGCTGAGCA TAATCCGGTC ATTGCCTTGT TCGTACCTGA ATCTGCCGGT GAATCTCGGC ATCGGGGGAG CCATGCACAG CGGCTATCGG TACGCTTACC AGAACGGATA CGACATTGCC GTGCAAATGG ACGGCGACGG GCAGCATCCG GCCAACGAAC TGCCAGCGGT GTTGCGGCCT ATTTTTCAGC AGGAGGCCGA TGTCGCTATT GGCTCCCGGT TTATCAGCCA TGAGGGGTTT CAGTCGTCGT TTAGCCGTCG GTTAGGGATT CAGTATTTTC GGTGGCTGAA CCAACTGCTC ATCGGCGAAA CCGTTCACGA CAGTACATCG GGCTTTCGGG CGTTCAACCG CCGAACTATT GACATCGTAA ATCGTTATTA TCCCGACGAA TACCCTGAGC CAGAGTCTAT TGTGCAATTT GGTTTGCAGG GACTGCGTAT CAAGGAAGTA CCGGTCCGAA TGCGTAATCG GGAAGAGGGC GTATCGTCCA TCAACACCAG TCGGGCGTTG TATTACATGC TCAAGGTGTC GCTGGGAATC ATATTTATGT ATTTTCGTCT GAACAATAAA CGGCATCGCT GA
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Protein sequence | MTPQPHILVI VPCYNEQGAI ASVVNELIAV RDRERYALDI LVVNDCSTDN SLSIIRSLPC SYLNLPVNLG IGGAMHSGYR YAYQNGYDIA VQMDGDGQHP ANELPAVLRP IFQQEADVAI GSRFISHEGF QSSFSRRLGI QYFRWLNQLL IGETVHDSTS GFRAFNRRTI DIVNRYYPDE YPEPESIVQF GLQGLRIKEV PVRMRNREEG VSSINTSRAL YYMLKVSLGI IFMYFRLNNK RHR
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