Gene Slin_5209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5209 
Symbol 
ID8728975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6358758 
End bp6359489 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content52% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003389980 
Protein GI284040050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.779057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCCC AACCGCATAT TCTGGTTATC GTACCCTGTT ACAATGAGCA GGGCGCCATT 
GCCAGTGTGG TGAATGAACT GATTGCCGTA CGGGATCGGG AAAGGTATGC GCTGGATATT
CTGGTTGTTA ATGATTGCTC TACCGATAAT TCGCTGAGCA TAATCCGGTC ATTGCCTTGT
TCGTACCTGA ATCTGCCGGT GAATCTCGGC ATCGGGGGAG CCATGCACAG CGGCTATCGG
TACGCTTACC AGAACGGATA CGACATTGCC GTGCAAATGG ACGGCGACGG GCAGCATCCG
GCCAACGAAC TGCCAGCGGT GTTGCGGCCT ATTTTTCAGC AGGAGGCCGA TGTCGCTATT
GGCTCCCGGT TTATCAGCCA TGAGGGGTTT CAGTCGTCGT TTAGCCGTCG GTTAGGGATT
CAGTATTTTC GGTGGCTGAA CCAACTGCTC ATCGGCGAAA CCGTTCACGA CAGTACATCG
GGCTTTCGGG CGTTCAACCG CCGAACTATT GACATCGTAA ATCGTTATTA TCCCGACGAA
TACCCTGAGC CAGAGTCTAT TGTGCAATTT GGTTTGCAGG GACTGCGTAT CAAGGAAGTA
CCGGTCCGAA TGCGTAATCG GGAAGAGGGC GTATCGTCCA TCAACACCAG TCGGGCGTTG
TATTACATGC TCAAGGTGTC GCTGGGAATC ATATTTATGT ATTTTCGTCT GAACAATAAA
CGGCATCGCT GA
 
Protein sequence
MTPQPHILVI VPCYNEQGAI ASVVNELIAV RDRERYALDI LVVNDCSTDN SLSIIRSLPC 
SYLNLPVNLG IGGAMHSGYR YAYQNGYDIA VQMDGDGQHP ANELPAVLRP IFQQEADVAI
GSRFISHEGF QSSFSRRLGI QYFRWLNQLL IGETVHDSTS GFRAFNRRTI DIVNRYYPDE
YPEPESIVQF GLQGLRIKEV PVRMRNREEG VSSINTSRAL YYMLKVSLGI IFMYFRLNNK
RHR