Gene Slin_5196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5196 
Symbol 
ID8728962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6341116 
End bp6342201 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content49% 
IMG OID 
ProductMannose-1-phosphate guanylyltransferase 
Protein accessionYP_003389967 
Protein GI284040037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.310908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATA CGTATGTTGT TATCATGGCG GGAGGTGTCG GAACGCGGTT CTGGCCTTTC 
AGCCGAACAA GCTATCCAAA GCAGTTTCAC GATGTACTCG GCACCGGCCG AACCCTGCTT
CAACAGACCG CCGACCGATT TGATGGCGTT TGTCCACCCG AAAATATTTT TATCGTTACC
AGCTCGCTCT ATAAAGATCT TTGCCAGCAG CAGCTTCCTC AATTGTCTGA CGACCAGGTG
TTGTGCGAGC CTGTGGCCCG AAATACCGCG CCCTGCATCG CTTACGCCTG TTACAAAATT
GCTCAACAAG ACCCGGAAGC TAACATTGTT GTAGCGCCTG CGGACCATAT TATCCTGAAA
GAAGAAGAGT TCAAACGGAC GATTCAGACC GCTCTCGACG CGACCAAAGG GCAGGATATT
CTGGTAACCC TTGGCATTCA GCCAAGCCGT CCCGATACGG GTTATGGGTA TATCCAGTAC
GTTGCGGAAG AGGGAGAATC CGCCGAAAAG TCAGCGCTAC GGCGGGTAAA GACATTCACC
GAGAAGCCCC ATCTGGAGCT TGCCCAACAG TTTCTGGAAA GTGGTGAGTT TGTCTGGAAT
GCCGGTATTT TCGTTTGGAA CGCCCAATCC ATTATCAAGG CTTTCGAAGC GCATTTGCCC
GAAGTTGCCG AGATTTTCGA AGAAGGAAAA GATGCCTATT ACACCGAACG GGAAAAAGCG
TTTGTTGATA AAGCTTACTC ACTCACGCGT AGCATCTCCA TCGACAATGG TATCATGGAA
AAGGCCGGGA ATGTGTACGT TGTGCTGAGT GACTTCGGCT GGTCGGATTT GGGTACCTGG
AAATCATTGT ATGAAGTATC GGACAAGAAC GATGACCTCA ACGTGATCGA CGGGCATATC
ATGCTGTACG ATACCAAAAA CTGTATCATA AAAACCCCGA AAGACCGGCT GGTGGTGGTT
AACGGACTGG ATGGCTACAT CGTGGCGGAG TACGACAATG TACTCATGAT TTGCCGCAAA
GAAGAAGAGC AGAAAGTCAA AAACTTTGTT GCCGACGCCA AAGAAAGGGG CATGGAGTTT
GTATAA
 
Protein sequence
MNHTYVVIMA GGVGTRFWPF SRTSYPKQFH DVLGTGRTLL QQTADRFDGV CPPENIFIVT 
SSLYKDLCQQ QLPQLSDDQV LCEPVARNTA PCIAYACYKI AQQDPEANIV VAPADHIILK
EEEFKRTIQT ALDATKGQDI LVTLGIQPSR PDTGYGYIQY VAEEGESAEK SALRRVKTFT
EKPHLELAQQ FLESGEFVWN AGIFVWNAQS IIKAFEAHLP EVAEIFEEGK DAYYTEREKA
FVDKAYSLTR SISIDNGIME KAGNVYVVLS DFGWSDLGTW KSLYEVSDKN DDLNVIDGHI
MLYDTKNCII KTPKDRLVVV NGLDGYIVAE YDNVLMICRK EEEQKVKNFV ADAKERGMEF
V