Gene Slin_5186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5186 
Symbol 
ID8728952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6331505 
End bp6331870 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content54% 
IMG OID 
Producttranscriptional repressor, CopY family 
Protein accessionYP_003389957 
Protein GI284040027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAA CCGACTCCGA ACTGGAAATC CTGCATGTGC TCTGGGCCAA TGGTCCCAGC 
ACGGTGCGGC AAGTCCACGA GAAGCTAAGC CAAAGCCGCG ACATCGGCTA CACAACGGCC
TTGAAATTAA TGCAGATTAT GCACGAGAAA GGCTTTGTAT CGCGTGAAGA AGAGGGTCGC
TCGCACACGT ACACAGCACT CGTCAGTGAA GAAGACACGC AGCGGAATCT GGTCGACCGC
TTTGTGGAAA CGGCCTTTCG GGGTTCGGCA TCCAAGCTGG TGATGCAGAT TCTGGGCCAG
CACAAGGCCT CACGCGAAGA GCTGGACGAG ATCAAAAAGC TGCTGAATGA TTTAAACCGG
GATTAA
 
Protein sequence
MKPTDSELEI LHVLWANGPS TVRQVHEKLS QSRDIGYTTA LKLMQIMHEK GFVSREEEGR 
SHTYTALVSE EDTQRNLVDR FVETAFRGSA SKLVMQILGQ HKASREELDE IKKLLNDLNR
D