| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5153 |
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| Symbol | |
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| ID | 8728919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6292117 |
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| End bp | 6293229 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_003389924 |
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| Protein GI | 284039994 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000400711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.218522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG CGTTGATTAC CGGAGTTACC GGACAAGATG GGGCTTATTT GGCCGAGTTA
CTGTTAGAAA AAGGATATGA AGTGCACGGC ATTAAACGCC GTAGTTCACT TTTTAATACA
CAAAGAATCG ATCATATGTA TGAAGACCCG CACGAAAAAA ACGTGCACTT TAAACTTCAT
TACGGTGATC TGTCCGATTC GACCAATATT ATTCGAATCA TTCAAGAGAT ACAGCCCGAC
GAAATCTATA ACCTCGGTGC TATGTCGCAC GTGCGGGTTA GCTTCGATGA GCCGGAGTAC
ACGGCTCAGG TAGATGGTAT CGGTACGTTG CGTATTCTGG AGGCCGTTCG ACTACTGGGC
CTGACCGAAA AGACCCGTAT TTATCAGGCA TCTACTTCTG AACTTTACGG TGGCGTTCAG
GGCCATGCTC AATCTGAAAC AACTCCTTTC TATCCCCGTT CTCCCTATGC CGTGGCAAAG
CTTTATGGCT ACTGGATTAC GGTCAACTAC CGGGAAGCTT ACAACATGTA CGCCTGTAAT
GGTATCCTGT TCAACCACGA GTCACCATTA CGGGGCGAAA CGTTCGTAAC GCGTAAAATA
ACCCGGGCTG TGTCACGTAT TGGACTGGGC CTTCAGGATA AAGTGTACCT GGGTAACCTG
GATTCCCTGC GCGACTGGGG CCATGCCAAA GATTATGTAG AAGCTATGTA CCTGATCCTT
CAGCAGGAGA AGCCGGAAGA TTTCGTCATT GCGACGGGTG TAACAACCAG CGTTCGGGAT
TTTGTCCGGA TGTCATTCGC TGAAATTGGG GTAGAGCTGG AGTTTACGGG CGAAGGTGTT
GCCGAAGTAG GTACCGTCGT TAGTTCGACA AATCCGGATT TCCCCGTTGA AGTTGGCAAG
GCCGTTGTTT GTATCGATCC ACGTTATTTC CGCCCAACCG AAGTTGACTT GCTGCTGGGT
GATCCAACCA AGGCAATGAC CAAATTGAAC TGGAAACCTA AATACGACCT TCCGGCGCTG
GTAAAAGATA TGATGAGCGC TGATATTGAT CTGTTCCGTC GTGATCAGCT CCTCGCTAAG
AGCGGCCACC AGGTATTGAA TTACTTTGAG TAA
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| Protein sequence | MKKALITGVT GQDGAYLAEL LLEKGYEVHG IKRRSSLFNT QRIDHMYEDP HEKNVHFKLH
YGDLSDSTNI IRIIQEIQPD EIYNLGAMSH VRVSFDEPEY TAQVDGIGTL RILEAVRLLG
LTEKTRIYQA STSELYGGVQ GHAQSETTPF YPRSPYAVAK LYGYWITVNY REAYNMYACN
GILFNHESPL RGETFVTRKI TRAVSRIGLG LQDKVYLGNL DSLRDWGHAK DYVEAMYLIL
QQEKPEDFVI ATGVTTSVRD FVRMSFAEIG VELEFTGEGV AEVGTVVSST NPDFPVEVGK
AVVCIDPRYF RPTEVDLLLG DPTKAMTKLN WKPKYDLPAL VKDMMSADID LFRRDQLLAK
SGHQVLNYFE
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